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LINC00114 long intergenic non-protein coding RNA 114 [ Homo sapiens (human) ]

Gene ID: 400866, updated on 13-May-2022

Summary

Official Symbol
LINC00114provided by HGNC
Official Full Name
long intergenic non-protein coding RNA 114provided by HGNC
Primary source
HGNC:HGNC:1265
See related
Ensembl:ENSG00000223806 MIM:611723; AllianceGenome:HGNC:1265
Gene type
ncRNA
RefSeq status
VALIDATED
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Also known as
C21orf24; NCRNA00114
Expression
Low expression observed in reference dataset See more
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Genomic context

See LINC00114 in Genome Data Viewer
Location:
21q22.2
Exon count:
8
Annotation release Status Assembly Chr Location
110 current GRCh38.p14 (GCF_000001405.40) 21 NC_000021.9 (38739021..38773477, complement)
110 current T2T-CHM13v2.0 (GCF_009914755.1) 21 NC_060945.1 (37122806..37157258, complement)
105.20220307 previous assembly GRCh37.p13 (GCF_000001405.25) 21 NC_000021.8 (40110945..40145401, complement)

Chromosome 21 - NC_000021.9Genomic Context describing neighboring genes Neighboring gene ETS transcription factor ERG Neighboring gene ERG, ETS transcription factor breakpoint cluster recombination region Neighboring gene uncharacterized LOC105372802 Neighboring gene small nuclear ribonucleoprotein polypeptide G pseudogene 13 Neighboring gene uncharacterized LOC107985480 Neighboring gene ETS proto-oncogene 2, transcription factor

Genomic regions, transcripts, and products

Expression

  • Project title: HPA RNA-seq normal tissues
  • Description: RNA-seq was performed of tissue samples from 95 human individuals representing 27 different tissues in order to determine tissue-specificity of all protein-coding genes
  • BioProject: PRJEB4337
  • Publication: PMID 24309898
  • Analysis date: Wed Apr 4 07:08:55 2018

Bibliography

GeneRIFs: Gene References Into Functions

What's a GeneRIF?

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

RNA

  1. NR_027065.2 RNA Sequence

    Status: VALIDATED

    Source sequence(s)
    AP001038, AY204746, BF063573
    Related
    ENST00000429621.1
  2. NR_027066.2 RNA Sequence

    Status: VALIDATED

    Source sequence(s)
    AP001038, AP001039, AY204745, BF063573

RefSeqs of Annotated Genomes: Homo sapiens Annotation Release 110 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p14 Primary Assembly

Genomic

  1. NC_000021.9 Reference GRCh38.p14 Primary Assembly

    Range
    38739021..38773477 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Alternate T2T-CHM13v2.0

Genomic

  1. NC_060945.1 Alternate T2T-CHM13v2.0

    Range
    37122806..37157258 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Suppressed Reference Sequence(s)

The following Reference Sequences have been suppressed. Explain

  1. NM_001001789.2: Suppressed sequence

    Description
    NM_001001789.2: This RefSeq was permanently suppressed because currently there is insufficient support for the transcript and the protein.
  2. NR_027067.1: Suppressed sequence

    Description
    NR_027067.1: This RefSeq was removed because currently there is insufficient support for this transcript.