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HERC2P2 HERC2 pseudogene 2 [ Homo sapiens (human) ]

Gene ID: 400322, updated on 23-Nov-2021

Summary

Official Symbol
HERC2P2provided by HGNC
Official Full Name
HERC2 pseudogene 2provided by HGNC
Primary source
HGNC:HGNC:4870
See related
Ensembl:ENSG00000276550
Gene type
pseudo
RefSeq status
VALIDATED
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Also known as
MN7; D15F37S3
Expression
Ubiquitous expression in urinary bladder (RPKM 32.1), brain (RPKM 25.7) and 25 other tissues See more
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Genomic context

See HERC2P2 in Genome Data Viewer
Location:
15q11.2
Exon count:
35
Annotation release Status Assembly Chr Location
109.20211119 current GRCh38.p13 (GCF_000001405.39) 15 NC_000015.10 (22494837..22590831)
105.20201022 previous assembly GRCh37.p13 (GCF_000001405.25) 15 NC_000015.9 (23282265..23378259, complement)

Chromosome 15 - NC_000015.10Genomic Context describing neighboring genes Neighboring gene pectinesterase inhibitor 10-like Neighboring gene HERC2 pseudogene 7 Neighboring gene HECT and RLD domain containing E3 ubiquitin protein ligase 2 pseudogene Neighboring gene uncharacterized LOC101927846 Neighboring gene RNA, 7SL, cytoplasmic 495, pseudogene Neighboring gene golgin A8 family member I, pseudogene

Genomic regions, transcripts, and products

Expression

  • Project title: HPA RNA-seq normal tissues
  • Description: RNA-seq was performed of tissue samples from 95 human individuals representing 27 different tissues in order to determine tissue-specificity of all protein-coding genes
  • BioProject: PRJEB4337
  • Publication: PMID 24309898
  • Analysis date: Wed Apr 4 07:08:55 2018

Bibliography

Interactions

Products Interactant Other Gene Complex Source Pubs Description

General gene information

Markers

Other Names

  • hect domain and RLD 2 pseudogene 2

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

RNA

  1. NR_002824.3 RNA Sequence

    Status: VALIDATED

    Source sequence(s)
    AA976147, AB002391, AC100757, AF041080, DB069140
    Related
    ENST00000619021.4

RefSeqs of Annotated Genomes: Homo sapiens Updated Annotation Release 109.20211119

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p13 Primary Assembly

Genomic

  1. NC_000015.10 Reference GRCh38.p13 Primary Assembly

    Range
    22494837..22590831
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Reference GRCh38.p13 PATCHES

Genomic

  1. NW_021160017.1 Reference GRCh38.p13 PATCHES

    Range
    3388384..3485185
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Reference GRCh38.p13 ALT_REF_LOCI_1

Genomic

  1. NT_187604.1 Reference GRCh38.p13 ALT_REF_LOCI_1

    Range
    138448..235204
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Suppressed Reference Sequence(s)

The following Reference Sequences have been suppressed. Explain

  1. NM_001024681.1: Suppressed sequence

    Description
    NM_001024681.1: This RefSeq record was removed by NCBI staff. Contact info@ncbi.nlm.nih.gov for further information.
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