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ACTE1P actin epsilon 1, pseudogene [ Homo sapiens (human) ]

Gene ID: 399923, updated on 27-May-2022

Summary

Official Symbol
ACTE1Pprovided by HGNC
Official Full Name
actin epsilon 1, pseudogeneprovided by HGNC
Primary source
HGNC:HGNC:51491
See related
Ensembl:ENSG00000172900 AllianceGenome:HGNC:51491
Gene type
ncRNA
RefSeq status
VALIDATED
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Expression
Low expression observed in reference dataset See more
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Genomic context

See ACTE1P in Genome Data Viewer
Location:
11q13.4
Exon count:
3
Annotation release Status Assembly Chr Location
110 current GRCh38.p14 (GCF_000001405.40) 11 NC_000011.10 (71405746..71423354, complement)
110 current T2T-CHM13v2.0 (GCF_009914755.1) 11 NC_060935.1 (71332735..71350297, complement)
105.20220307 previous assembly GRCh37.p13 (GCF_000001405.25) 11 NC_000011.9 (71116792..71134400, complement)

Chromosome 11 - NC_000011.10Genomic Context describing neighboring genes Neighboring gene SH3 and multiple ankyrin repeat domains 2 Neighboring gene microRNA 3664 Neighboring gene uncharacterized LOC124902706 Neighboring gene actin, aortic smooth muscle-like Neighboring gene NAD synthetase 1 Neighboring gene 7-dehydrocholesterol reductase Neighboring gene microRNA 6754

Genomic regions, transcripts, and products

Expression

  • Project title: HPA RNA-seq normal tissues
  • Description: RNA-seq was performed of tissue samples from 95 human individuals representing 27 different tissues in order to determine tissue-specificity of all protein-coding genes
  • BioProject: PRJEB4337
  • Publication: PMID 24309898
  • Analysis date: Wed Apr 4 07:08:55 2018

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

RNA

  1. NR_038862.1 RNA Sequence

    Status: VALIDATED

    Source sequence(s)
    AP002387
    Related
    ENST00000331301.8

RefSeqs of Annotated Genomes: Homo sapiens Annotation Release 110 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p14 Primary Assembly

Genomic

  1. NC_000011.10 Reference GRCh38.p14 Primary Assembly

    Range
    71405746..71423354 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Alternate T2T-CHM13v2.0

Genomic

  1. NC_060935.1 Alternate T2T-CHM13v2.0

    Range
    71332735..71350297 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Suppressed Reference Sequence(s)

The following Reference Sequences have been suppressed. Explain

  1. NM_001001680.1: Suppressed sequence

    Description
    NM_001001680.1: This RefSeq was permanently suppressed because the transcript is not abundant, the annotated CDS has sequence similarity to the MIR repeat, and the protein is not supported.