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LRRC26 leucine rich repeat containing 26 [ Homo sapiens (human) ]

Gene ID: 389816, updated on 12-Mar-2017
Official Symbol
LRRC26provided by HGNC
Official Full Name
leucine rich repeat containing 26provided by HGNC
Primary source
HGNC:HGNC:31409
See related
Ensembl:ENSG00000184709 MIM:613505; Vega:OTTHUMG00000020980
Gene type
protein coding
RefSeq status
VALIDATED
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Also known as
CAPC; bA350O14.10
Orthologs
Location:
9q34.3
Exon count:
2
Annotation release Status Assembly Chr Location
108 current GRCh38.p7 (GCF_000001405.33) 9 NC_000009.12 (137168758..137170039, complement)
105 previous assembly GRCh37.p13 (GCF_000001405.25) 9 NC_000009.11 (140063210..140064491, complement)

Chromosome 9 - NC_000009.12Genomic Context describing neighboring genes Neighboring gene dipeptidyl peptidase 7 Neighboring gene glutamate ionotropic receptor NMDA type subunit 1 Neighboring gene uncharacterized LOC105376328 Neighboring gene microRNA 3621 Neighboring gene transmembrane protein 210 Neighboring gene anaphase promoting complex subunit 2 Neighboring gene SS nuclear autoantigen 1

  • Project title: HPA RNA-seq normal tissues
  • Description: RNA-seq was performed of tissue samples from 95 human individuals representing 27 different tissues in order to determine tissue-specificity of all protein-coding genes
  • BioProject: PRJEB4337
  • Publication: PMID 24309898
  • Analysis date: Wed Jun 15 11:32:44 2016

GeneRIFs: Gene References Into FunctionsWhat's a GeneRIF?

Markers

Homology

Gene Ontology Provided by GOA

Function Evidence Code Pubs
potassium channel regulator activity IDA
Inferred from Direct Assay
more info
PubMed 
protein binding IPI
Inferred from Physical Interaction
more info
PubMed 
Process Evidence Code Pubs
ion transport IEA
Inferred from Electronic Annotation
more info
 
regulation of molecular function IEA
Inferred from Electronic Annotation
more info
 
Component Evidence Code Pubs
cytoplasm IEA
Inferred from Electronic Annotation
more info
 
cytoskeleton IEA
Inferred from Electronic Annotation
more info
 
extracellular exosome IDA
Inferred from Direct Assay
more info
PubMed 
fibrillar center IDA
Inferred from Direct Assay
more info
 
nucleolus IDA
Inferred from Direct Assay
more info
 
plasma membrane IDA
Inferred from Direct Assay
more info
 
voltage-gated potassium channel complex IDA
Inferred from Direct Assay
more info
PubMed 
Preferred Names
leucine-rich repeat-containing protein 26
Names
BK channel auxiliary gamma subunit LRRC26
BK channel auxilliary gamma subunit LRRC26
cytokeratin associated protein
cytokeratin-associated protein in cancer

RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001013653.2NP_001013675.1  leucine-rich repeat-containing protein 26 precursor

    See identical proteins and their annotated locations for NP_001013675.1

    Status: VALIDATED

    Source sequence(s)
    CB160046, DN996987, DQ355157
    Consensus CDS
    CCDS35184.1
    UniProtKB/Swiss-Prot
    Q2I0M4
    Related
    ENSP00000360597, OTTHUMP00000022690, ENST00000371542, OTTHUMT00000055307
    Conserved Domains (3) summary
    cd00116
    Location:97253
    LRR_RI; Leucine-rich repeats (LRRs), ribonuclease inhibitor (RI)-like subfamily. LRRs are 20-29 residue sequence motifs present in many proteins that participate in protein-protein interactions and have different functions and cellular locations. LRRs correspond ...
    sd00033
    Location:97120
    LRR_RI; leucine-rich repeat [structural motif]
    pfam13855
    Location:97155
    LRR_8; Leucine rich repeat

RefSeqs of Annotated Genomes: Homo sapiens Annotation Release 108 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p7 Primary Assembly

Genomic

  1. NC_000009.12 Reference GRCh38.p7 Primary Assembly

    Range
    137168758..137170039 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Alternate CHM1_1.1

Genomic

  1. NC_018920.2 Alternate CHM1_1.1

    Range
    140211899..140213180 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
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