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TPT1P9 TPT1 pseudogene 9 [ Homo sapiens (human) ]

Gene ID: 389787, updated on 10-Oct-2023

Summary

Official Symbol
TPT1P9provided by HGNC
Official Full Name
TPT1 pseudogene 9provided by HGNC
Primary source
HGNC:HGNC:49299
See related
AllianceGenome:HGNC:49299
Gene type
pseudo
RefSeq status
INFERRED
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
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Genomic context

See TPT1P9 in Genome Data Viewer
Location:
9q33.1
Annotation release Status Assembly Chr Location
RS_2023_10 current GRCh38.p14 (GCF_000001405.40) 9 NC_000009.12 (118082693..118083496, complement)
RS_2023_10 current T2T-CHM13v2.0 (GCF_009914755.1) 9 NC_060933.1 (130276597..130277400, complement)
105.20220307 previous assembly GRCh37.p13 (GCF_000001405.25) 9 NC_000009.11 (120844971..120845774, complement)

Chromosome 9 - NC_000009.12Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC105376244 Neighboring gene uncharacterized LOC105376243 Neighboring gene uncharacterized LOC105376246 Neighboring gene uncharacterized LOC105376247 Neighboring gene MPRA-validated peak7325 silencer Neighboring gene H3K4me1 hESC enhancer GRCh37_chr9:121126258-121126758 Neighboring gene NANOG hESC enhancer GRCh37_chr9:121244479-121245028 Neighboring gene OCT4-NANOG hESC enhancer GRCh37_chr9:121247960-121248504 Neighboring gene uncharacterized LOC105376248 Neighboring gene uncharacterized LOC105376249

Genomic regions, transcripts, and products

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

Genomic

  1. NG_021634.3 

    Range
    101..904
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2023_10

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p14 Primary Assembly

Genomic

  1. NC_000009.12 Reference GRCh38.p14 Primary Assembly

    Range
    118082693..118083496 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Alternate T2T-CHM13v2.0

Genomic

  1. NC_060933.1 Alternate T2T-CHM13v2.0

    Range
    130276597..130277400 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)