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GRASLND glycosaminoglycan regulatory associated long non-coding RNA [ Homo sapiens (human) ]

Gene ID: 386597, updated on 19-Jul-2022

Summary

Official Symbol
GRASLNDprovided by HGNC
Official Full Name
glycosaminoglycan regulatory associated long non-coding RNAprovided by HGNC
Primary source
HGNC:HGNC:30963
See related
Ensembl:ENSG00000228203 AllianceGenome:HGNC:30963
Gene type
ncRNA
RefSeq status
VALIDATED
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Also known as
RNF144A-AS1
Expression
Biased expression in spleen (RPKM 6.3), adrenal (RPKM 3.6) and 3 other tissues See more
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Genomic context

See GRASLND in Genome Data Viewer
Location:
2p25.1
Exon count:
5
Annotation release Status Assembly Chr Location
110 current GRCh38.p14 (GCF_000001405.40) 2 NC_000002.12 (6912276..6918682, complement)
110 current T2T-CHM13v2.0 (GCF_009914755.1) 2 NC_060926.1 (6933777..6940181, complement)
105.20220307 previous assembly GRCh37.p13 (GCF_000001405.25) 2 NC_000002.11 (7052407..7058813, complement)

Chromosome 2 - NC_000002.12Genomic Context describing neighboring genes Neighboring gene negative regulator of interferon response Neighboring gene cytidine/uridine monophosphate kinase 2 Neighboring gene radical S-adenosyl methionine domain containing 2 Neighboring gene ring finger protein 144A Neighboring gene Sharpr-MPRA regulatory region 7309 Neighboring gene Sharpr-MPRA regulatory region 7427/13434

Genomic regions, transcripts, and products

Expression

  • Project title: HPA RNA-seq normal tissues
  • Description: RNA-seq was performed of tissue samples from 95 human individuals representing 27 different tissues in order to determine tissue-specificity of all protein-coding genes
  • BioProject: PRJEB4337
  • Publication: PMID 24309898
  • Analysis date: Wed Apr 4 07:08:55 2018

General gene information

Markers

Other Names

  • RNF144A antisense RNA 1 (non-protein coding)

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

RNA

  1. NR_033997.1 RNA Sequence

    Status: VALIDATED

    Source sequence(s)
    AC017076
    Related
    ENST00000418970.7

RefSeqs of Annotated Genomes: Homo sapiens Annotation Release 110 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p14 Primary Assembly

Genomic

  1. NC_000002.12 Reference GRCh38.p14 Primary Assembly

    Range
    6912276..6918682 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Alternate T2T-CHM13v2.0

Genomic

  1. NC_060926.1 Alternate T2T-CHM13v2.0

    Range
    6933777..6940181 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)