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tm4sf4.L transmembrane 4 L six family member 4 L homeolog [ Xenopus laevis (African clawed frog) ]

Gene ID: 380026, updated on 7-Sep-2023

Summary

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Official Symbol
tm4sf4.L
Official Full Name
transmembrane 4 L six family member 4 L homeolog
Primary source
Xenbase:XB-GENE-6254228
Locus tag
XELAEV_18027762mg
See related
EnsemblRapid:ENSXLAG00005017042
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Xenopus laevis
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Amphibia; Batrachia; Anura; Pipoidea; Pipidae; Xenopodinae; Xenopus; Xenopus
Also known as
tm4sf4
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Genomic context

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Location:
chromosome: 5L
Exon count:
5
Annotation release Status Assembly Chr Location
101 current Xenopus_laevis_v10.1 (GCF_017654675.1) 5L NC_054379.1 (130932565..130937540)
100 previous assembly Xenopus_laevis_v2 (GCF_001663975.1) 5L NC_030732.1 (120184502..120189485)

Chromosome 5L - NC_054379.1Genomic Context describing neighboring genes Neighboring gene provisional ortholog of gamma-glutamyltransferase 1 L homeolog Neighboring gene uncharacterized XB5965330 L homeolog Neighboring gene WW domain containing transcription regulator 1 L homeolog Neighboring gene COMM domain containing 2 L homeolog

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Genetic and genomic tools for Xenopus research: The NIH Xenopus initiative. Klein SL, et al. Dev Dyn, 2002 Dec. PMID 12454917
  2. Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. Strausberg RL, et al. Proc Natl Acad Sci U S A, 2002 Dec 24. PMID 12477932, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Clone Names

  • MGC64439

Gene Ontology Provided by Xenbase

Component Evidence Code Pubs
located_in membrane IEA
Inferred from Electronic Annotation
more info
  

General protein information

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Preferred Names
transmembrane 4 L six family member 4 L homeolog
Names
transmembrane 4 superfamily member 4

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001086865.1 → NP_001080334.1  transmembrane 4 L six family member 4 L homeolog

    See identical proteins and their annotated locations for NP_001080334.1

    Status: PROVISIONAL

    Source sequence(s)
    BC054239
    UniProtKB/TrEMBL
    A0A974CY91, Q7SYW6
    Related
    ENSXLAP00005050253.1, ENSXLAT00005051395.1
    Conserved Domains (1) summary
    pfam05805
    Location:1 → 181
    L6_membrane; L6 membrane protein

RefSeqs of Annotated Genomes: Xenopus laevis Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Xenopus_laevis_v10.1 Primary Assembly

Genomic

  1. NC_054379.1 Reference Xenopus_laevis_v10.1 Primary Assembly

    Range
    130932565..130937540
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
Nucleotide Protein Strain
Heading Accession and Version

Gene LinkOut

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