NEW
Try the new Transcript table
These reference sequences exist independently of genome builds. Explain
These reference sequences are curated independently of the genome
annotation cycle, so their versions may not match the RefSeq versions in the current
genome build. Identify version mismatches by comparing the version of the RefSeq in
this section to the one reported in Genomic regions,
transcripts, and products above.
Genomic
-
NG_027728.1Â RefSeqGene
- Range
-
5014..24705
- Download
- GenBank, FASTA, Sequence Viewer (Graphics)
mRNA and Protein(s)
-
NM_001195286.2 → NP_001182215.1  interferon regulatory factor 4 isoform 2
See identical proteins and their annotated locations for NP_001182215.1
Status: REVIEWED
- Description
- Transcript Variant: This variant (2) uses an alternate in-frame acceptor splice site at an internal coding exon compared to variant 1, resulting in an isoform (2) that is 1 aa shorter than isoform 1.
- Source sequence(s)
-
AL512308, AL589962, AW197089, BG230623, BM551611, KF458069, U52682, U63738
- Consensus CDS
-
CCDS93847.1
- UniProtKB/TrEMBL
-
F2Z3D5
- Related
- ENSP00000512940.1, ENST00000696871.1
- Conserved Domains (2) summary
-
- pfam00605
Location:23 → 128
- IRF; Interferon regulatory factor transcription factor
- pfam10401
Location:249 → 417
- IRF-3; Interferon-regulatory factor 3
-
NM_002460.4 → NP_002451.2  interferon regulatory factor 4 isoform 1
See identical proteins and their annotated locations for NP_002451.2
Status: REVIEWED
- Description
- Transcript Variant: This variant (1) encodes the longer isoform (1).
- Source sequence(s)
-
AL512308, AL589962, AW197089, BC015752, BG230623, BM551611, KF458069, U52682, U63738
- Consensus CDS
-
CCDS4469.1
- UniProtKB/Swiss-Prot
- Q15306, Q5VUI7, Q99660
- UniProtKB/TrEMBL
-
F2Z3D5
- Related
- ENSP00000370343.4, ENST00000380956.9
- Conserved Domains (2) summary
-
- pfam00605
Location:23 → 128
- IRF; Interferon regulatory factor transcription factor
- pfam10401
Location:250 → 418
- IRF-3; Interferon-regulatory factor 3
RNA
-
NR_046000.3 RNA Sequence
Status: REVIEWED
- Description
- Transcript Variant: This variant (4) contains an alternate 3' splice pattern, compared to variant 1. This variant is represented as non-coding because the use of the 5'-most expected translational start codon, as used in variant 1, renders the transcript a candidate for nonsense-mediated mRNA decay (NMD).
- Source sequence(s)
-
AL512308, AL589962, AW197089, D78261, KF458069, U52682
The following Reference Sequences have been suppressed. Explain
These RefSeqs were suppressed for the
cited reason(s). Suppressed RefSeqs do not appear in BLAST databases, related
sequence links, or BLAST links (BLink), but may still be retrieved by clicking on
their accession.version below.
-
NR_036585.1: Suppressed sequence
- Description
- NR_036585.1: This RefSeq was permanently suppressed because currently there is support for the transcript.