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FAM183BP family with sequence similarity 183 member B, pseudogene [ Homo sapiens (human) ]

Gene ID: 340286, updated on 13-May-2022

Summary

Official Symbol
FAM183BPprovided by HGNC
Official Full Name
family with sequence similarity 183 member B, pseudogeneprovided by HGNC
Gene description
acyloxyacyl hydrolase (neutrophil)
Primary source
HGNC:HGNC:34511
See related
Ensembl:ENSG00000164556 AllianceGenome:HGNC:34511
Gene type
pseudo
RefSeq status
VALIDATED
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Also known as
THEG6; FAM183B
Summary
Predicted to be located in cytoplasm and cytoskeleton. Predicted to be active in ciliary base. [provided by Alliance of Genome Resources, Apr 2022]
Expression
Restricted expression toward testis (RPKM 7.5) See more
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Genomic context

See FAM183BP in Genome Data Viewer
Location:
7p14.1
Exon count:
2
Annotation release Status Assembly Chr Location
110 current GRCh38.p14 (GCF_000001405.40) 7 NC_000007.14 (38685346..38687089, complement)
110 current T2T-CHM13v2.0 (GCF_009914755.1) 7 NC_060931.1 (38842029..38843772, complement)
105.20220307 previous assembly GRCh37.p13 (GCF_000001405.25) 7 NC_000007.13 (38724946..38726689, complement)

Chromosome 7 - NC_000007.14Genomic Context describing neighboring genes Neighboring gene amphiphysin Neighboring gene RNA, 7SL, cytoplasmic 83, pseudogene Neighboring gene keratin 8 pseudogene 20 Neighboring gene VPS41 subunit of HOPS complex Neighboring gene POU6F2 antisense RNA 2 Neighboring gene POU class 6 homeobox 2

Genomic regions, transcripts, and products

Expression

  • Project title: HPA RNA-seq normal tissues
  • Description: RNA-seq was performed of tissue samples from 95 human individuals representing 27 different tissues in order to determine tissue-specificity of all protein-coding genes
  • BioProject: PRJEB4337
  • Publication: PMID 24309898
  • Analysis date: Wed Apr 4 07:08:55 2018

General gene information

Other Names

  • Protein FAM183B
  • acyloxyacyl hydrolase (neutrophil)
  • family with sequence similarity 183, member B
  • testis highly expressed protein 6

Gene Ontology Provided by GOA

Component Evidence Code Pubs
is_active_in ciliary base IBA
Inferred from Biological aspect of Ancestor
more info
PubMed 
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
 
located_in cytoskeleton IEA
Inferred from Electronic Annotation
more info
 

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

RNA

  1. NR_028347.1 RNA Sequence

    Status: VALIDATED

    Source sequence(s)
    AC011309
    Related
    ENST00000409072.3

RefSeqs of Annotated Genomes: Homo sapiens Annotation Release 110 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p14 Primary Assembly

Genomic

  1. NC_000007.14 Reference GRCh38.p14 Primary Assembly

    Range
    38685346..38687089 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Alternate T2T-CHM13v2.0

Genomic

  1. NC_060931.1 Alternate T2T-CHM13v2.0

    Range
    38842029..38843772 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Suppressed Reference Sequence(s)

The following Reference Sequences have been suppressed. Explain

  1. NM_001105282.2: Suppressed sequence

    Description
    NM_001105282.2: This RefSeq was permanently suppressed because currently there is support for the transcript but not for the protein.