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Eeig2 EEIG family member 2 [ Mus musculus (house mouse) ]

Gene ID: 329739, updated on 2-Nov-2024

Summary

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Official Symbol
Eeig2provided by MGI
Official Full Name
EEIG family member 2provided by MGI
Primary source
MGI:MGI:3036259
See related
Ensembl:ENSMUSG00000040339 AllianceGenome:MGI:3036259
Gene type
protein coding
RefSeq status
VALIDATED
Organism
Mus musculus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
Also known as
Fam102b; 1600010D10Rik; B430201A12Rik
Summary
Is expressed in nervous system. Orthologous to human EEIG2 (EEIG family member 2). [provided by Alliance of Genome Resources, Nov 2024]
Expression
Broad expression in subcutaneous fat pad adult (RPKM 11.4), CNS E18 (RPKM 10.5) and 23 other tissues See more
Orthologs
human all
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Genomic context

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See Eeig2 in Genome Data Viewer
Location:
3 F3; 3 48.04 cM
Exon count:
11
Annotation release Status Assembly Chr Location
RS_2024_02 current GRCm39 (GCF_000001635.27) 3 NC_000069.7 (108878313..108935588, complement)
108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 3 NC_000069.6 (108970997..109027607, complement)

Chromosome 3 - NC_000069.7Genomic Context describing neighboring genes Neighboring gene fibronectin type III domain containing 7 Neighboring gene STARR-positive B cell enhancer ABC_E3460 Neighboring gene STARR-positive B cell enhancer ABC_E4576 Neighboring gene PRP38 pre-mRNA processing factor 38 (yeast) domain containing B Neighboring gene HEN1 methyltransferase homolog 1 (Arabidopsis) Neighboring gene predicted gene 43221 Neighboring gene STARR-positive B cell enhancer mm9_chr3:108830639-108830939 Neighboring gene STARR-positive B cell enhancer mm9_chr3:108865935-108866236 Neighboring gene predicted gene, 36778 Neighboring gene solute carrier family 25, member 54

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Expression

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  • Project title: Mouse ENCODE transcriptome data Mouse ENCODE transcriptome data
  • Description: RNA profiling data sets generated by the Mouse ENCODE project.
  • BioProject: PRJNA66167
  • Publication: PMID 25409824
  • Analysis date: n/a

Bibliography

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Related articles in PubMed

  1. In vivo and in vitro investigations of heterozygous nebulin knock-out mice disclose a mild skeletal muscle phenotype. Gineste C, et al. Neuromuscul Disord, 2013 Apr. PMID 23375831
  2. Construction of long-transcript enriched cDNA libraries from submicrogram amounts of total RNAs by a universal PCR amplification method. Piao Y, et al. Genome Res, 2001 Sep. PMID 11544199, Free PMC Article
  3. A conditional knockout resource for the genome-wide study of mouse gene function. Skarnes WC, et al. Nature, 2011 Jun 15. PMID 21677750, Free PMC Article
  4. A high-resolution anatomical atlas of the transcriptome in the mouse embryo. Diez-Roux G, et al. PLoS Biol, 2011 Jan 18. PMID 21267068, Free PMC Article
  5. Antisense transcription in the mammalian transcriptome. Katayama S, et al. Science, 2005 Sep 2. PMID 16141073

See all (11) citations in PubMed

GeneRIFs: Gene References Into Functions

Variation

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Alleles

Alleles of this type are documented at Mouse Genome Informatics  (MGI)
  • Endonuclease-mediated (1) 

General gene information

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Markers

Homology

Gene Ontology Provided by MGI

Function Evidence Code Pubs
enables molecular_function ND
No biological Data available
more info
  
Process Evidence Code Pubs
involved_in biological_process ND
No biological Data available
more info
  
Component Evidence Code Pubs
is_active_in cellular_component ND
No biological Data available
more info
  

General protein information

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Preferred Names
EEIG family member 2
Names
family with sequence similarity 102, member B
protein FAM102B

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001163567.1 → NP_001157039.1  EEIG family member 2

    Status: VALIDATED

    Source sequence(s)
    AK046595, AL671894, AL671921
    Consensus CDS
    CCDS51051.1
    UniProtKB/Swiss-Prot
    Q8BQS4
    UniProtKB/TrEMBL
    E9Q4R1
    Related
    ENSMUSP00000131904.2, ENSMUST00000171143.2
    Conserved Domains (1) summary
    pfam10358
    Location:9 → 149
    NT-C2; N-terminal C2 in EEIG1 and EHBP1 proteins

RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCm39 C57BL/6J

Genomic

  1. NC_000069.7 Reference GRCm39 C57BL/6J

    Range
    108878313..108935588 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_036163141.1 → XP_036019034.1  EEIG family member 2 isoform X1

    UniProtKB/Swiss-Prot
    Q8BQS4
    Conserved Domains (1) summary
    pfam10358
    Location:9 → 149
    NT-C2; N-terminal C2 in EEIG1 and EHBP1 proteins
Nucleotide Protein Strain
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
Q8BQS4.2 GenPept UniProtKB/Swiss-Prot:Q8BQS4

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

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