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EEIG2 EEIG family member 2 [ Homo sapiens (human) ]

Gene ID: 284611, updated on 5-Mar-2024

Summary

Official Symbol
EEIG2provided by HGNC
Official Full Name
EEIG family member 2provided by HGNC
Primary source
HGNC:HGNC:27637
See related
Ensembl:ENSG00000162636 AllianceGenome:HGNC:27637
Gene type
protein coding
RefSeq status
VALIDATED
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Also known as
SYM-3B; FAM102B
Expression
Ubiquitous expression in brain (RPKM 11.6), gall bladder (RPKM 11.3) and 24 other tissues See more
Orthologs
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Genomic context

See EEIG2 in Genome Data Viewer
Location:
1p13.3
Exon count:
11
Annotation release Status Assembly Chr Location
RS_2023_10 current GRCh38.p14 (GCF_000001405.40) 1 NC_000001.11 (108560100..108639322)
RS_2023_10 current T2T-CHM13v2.0 (GCF_009914755.1) 1 NC_060925.1 (108593088..108672314)
105.20220307 previous assembly GRCh37.p13 (GCF_000001405.25) 1 NC_000001.10 (109102722..109181944)

Chromosome 1 - NC_000001.11Genomic Context describing neighboring genes Neighboring gene OCT4-NANOG hESC enhancer GRCh37_chr1:109045678-109046211 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 1134 Neighboring gene ST13, Hsp70 interacting protein pseudogene 21 Neighboring gene RPL7L1 pseudogene 21 Neighboring gene NANOG hESC enhancer GRCh37_chr1:109060171-109060846 Neighboring gene CRISPRi-validated cis-regulatory element chr1.7484 Neighboring gene Sharpr-MPRA regulatory region 3357 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 1135 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 1423 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 1424 Neighboring gene ReSE screen-validated silencer GRCh37_chr1:109111447-109111662 Neighboring gene MPRA-validated peak351 silencer Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr1:109203434-109204023 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr1:109204024-109204612 Neighboring gene HEN methyltransferase 1 Neighboring gene uncharacterized LOC105378890

Genomic regions, transcripts, and products

Expression

  • Project title: HPA RNA-seq normal tissues
  • Description: RNA-seq was performed of tissue samples from 95 human individuals representing 27 different tissues in order to determine tissue-specificity of all protein-coding genes
  • BioProject: PRJEB4337
  • Publication: PMID 24309898
  • Analysis date: Wed Apr 4 07:08:55 2018

Interactions

Products Interactant Other Gene Complex Source Pubs Description

General gene information

Markers

Clone Names

  • DKFZp779B126, DKFZp686N01110

General protein information

Preferred Names
EEIG family member 2
Names
family with sequence similarity 102 member B
protein FAM102B
sym-3 homolog B

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001010883.3NP_001010883.2  EEIG family member 2

    See identical proteins and their annotated locations for NP_001010883.2

    Status: VALIDATED

    Source sequence(s)
    AL160171
    Consensus CDS
    CCDS30786.2
    UniProtKB/Swiss-Prot
    A1L1A1, B0QZ46, B0QZ47, Q5T8I3, Q68DH7
    Related
    ENSP00000359052.3, ENST00000370035.8
    Conserved Domains (1) summary
    pfam10358
    Location:9149
    NT-C2; N-terminal C2 in EEIG1 and EHBP1 proteins

RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2023_10

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p14 Primary Assembly

Genomic

  1. NC_000001.11 Reference GRCh38.p14 Primary Assembly

    Range
    108560100..108639322
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Alternate T2T-CHM13v2.0

Genomic

  1. NC_060925.1 Alternate T2T-CHM13v2.0

    Range
    108593088..108672314
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)