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FAM102B family with sequence similarity 102 member B [ Homo sapiens (human) ]

Gene ID: 284611, updated on 11-Jun-2021

Summary

Official Symbol
FAM102Bprovided by HGNC
Official Full Name
family with sequence similarity 102 member Bprovided by HGNC
Primary source
HGNC:HGNC:27637
See related
Ensembl:ENSG00000162636
Gene type
protein coding
RefSeq status
VALIDATED
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Also known as
SYM-3B
Expression
Ubiquitous expression in brain (RPKM 11.6), gall bladder (RPKM 11.3) and 24 other tissues See more
Orthologs
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Genomic context

See FAM102B in Genome Data Viewer
Location:
1p13.3
Exon count:
11
Annotation release Status Assembly Chr Location
109.20210514 current GRCh38.p13 (GCF_000001405.39) 1 NC_000001.11 (108560100..108639322)
105.20201022 previous assembly GRCh37.p13 (GCF_000001405.25) 1 NC_000001.10 (109102722..109181944)

Chromosome 1 - NC_000001.11Genomic Context describing neighboring genes Neighboring gene CRISPRi-validated cis-regulatory element chr1.7484 Neighboring gene Sharpr-MPRA regulatory region 3357 Neighboring gene HEN methyltransferase 1 Neighboring gene uncharacterized LOC105378890

Genomic regions, transcripts, and products

Expression

  • Project title: HPA RNA-seq normal tissues
  • Description: RNA-seq was performed of tissue samples from 95 human individuals representing 27 different tissues in order to determine tissue-specificity of all protein-coding genes
  • BioProject: PRJEB4337
  • Publication: PMID 24309898
  • Analysis date: Wed Apr 4 07:08:55 2018

Interactions

Products Interactant Other Gene Complex Source Pubs Description

General gene information

Markers

Homology

Clone Names

  • DKFZp779B126, DKFZp686N01110

General protein information

Preferred Names
protein FAM102B
Names
sym-3 homolog B

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001010883.3NP_001010883.2  protein FAM102B

    See identical proteins and their annotated locations for NP_001010883.2

    Status: VALIDATED

    Source sequence(s)
    AL160171
    Consensus CDS
    CCDS30786.2
    UniProtKB/Swiss-Prot
    Q5T8I3
    Related
    ENSP00000359052.3, ENST00000370035.8
    Conserved Domains (1) summary
    pfam10358
    Location:9149
    NT-C2; N-terminal C2 in EEIG1 and EHBP1 proteins

RefSeqs of Annotated Genomes: Homo sapiens Updated Annotation Release 109.20210514

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p13 Primary Assembly

Genomic

  1. NC_000001.11 Reference GRCh38.p13 Primary Assembly

    Range
    108560100..108639322
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
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