U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

CNK01680 hypothetical protein [ Cryptococcus neoformans var. neoformans JEC21 ]

Gene ID: 3254526, updated on 17-May-2024

Summary

Go to the top of the page Help
Gene symbol
CNK01680
Gene description
hypothetical protein
Locus tag
CNK01680
See related
FungiDB:CNK01680; VEuPathDB:CNK01680
Gene type
protein coding
RNA name
conserved hypothetical protein
RefSeq status
PROVISIONAL
Organism
Cryptococcus neoformans var. neoformans JEC21 (strain: JEC21, serotype: D)
Lineage
Eukaryota; Fungi; Dikarya; Basidiomycota; Agaricomycotina; Tremellomycetes; Tremellales; Cryptococcaceae; Cryptococcus; Cryptococcus neoformans species complex
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

Go to the top of the page Help
Location:
chromosome: 11
Exon count:
15
Sequence:
Chromosome: 11; NC_006680.1 (491240..496840)

Chromosome 11 - NC_006680.1Genomic Context describing neighboring genes Neighboring gene hypothetical protein Neighboring gene mitochondrion organization and biogenesis-related protein, putative Neighboring gene hypothetical protein Neighboring gene hypothetical protein Neighboring gene hypothetical protein

Genomic regions, transcripts, and products

Go to the top of the page Help
Genomic Sequence:
NC_006680.1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

Go to the top of the pageHelp

Related articles in PubMed

  1. The genome of the basidiomycetous yeast and human pathogen Cryptococcus neoformans. Loftus BJ, et al. Science, 2005 Feb 25. PMID 15653466, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

Go to the top of the page Help

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables ATP binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables protein serine/threonine kinase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in autophagy of peroxisome IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in late endosome to vacuole transport IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in macroautophagy IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in protein phosphorylation IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in protein targeting to vacuole IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in late endosome IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in nucleus-vacuole junction IEA
Inferred from Electronic Annotation
more info
 PubMed 
part_of phosphatidylinositol 3-kinase complex, class III, type I IEA
Inferred from Electronic Annotation
more info
 PubMed 
part_of phosphatidylinositol 3-kinase complex, class III, type II IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

Go to the top of the page Help
Preferred Names
hypothetical protein

NCBI Reference Sequences (RefSeq)

Go to the top of the page Help

NEW Try the new Transcript table

Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_006680.1 Reference assembly

    Range
    491240..496840
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_567843.2 → XP_567843.1  conserved hypothetical protein [Cryptococcus neoformans var. neoformans JEC21]

    See identical proteins and their annotated locations for XP_567843.1

    Status: PROVISIONAL

    UniProtKB/TrEMBL
    A0A225ZHL8, Q55JZ9, Q5K9K1
    Conserved Domains (8) summary
    COG1413
    Location:420 → 647
    HEAT; HEAT repeat [General function prediction only]
    COG2319
    Location:1083 → 1271
    WD40; WD40 repeat [General function prediction only]
    cd13980
    Location:24 → 314
    STKc_Vps15; Catalytic domain of the Serine/Threonine kinase, Vacuolar protein sorting-associated protein 15
    pfam00069
    Location:43 → 303
    Pkinase; Protein kinase domain
    pfam10363
    Location:425 → 495
    RTP1_C1; Required for nuclear transport of RNA pol II C-terminus 1
    sd00044
    Location:467 → 491
    HEAT; HEAT repeat [structural motif]
    sd00039
    Location:1078 → 1119
    7WD40; WD40 repeat [structural motif]
    cl02567
    Location:1066 → 1283
    WD40; WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from ...
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

Molecular Biology Databases
Research Materials