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Ubald2 UBA-like domain containing 2 [ Mus musculus (house mouse) ]

Gene ID: 319370, updated on 5-Mar-2024

Summary

Official Symbol
Ubald2provided by MGI
Official Full Name
UBA-like domain containing 2provided by MGI
Primary source
MGI:MGI:1914635
See related
Ensembl:ENSMUSG00000050628 AllianceGenome:MGI:1914635
Gene type
protein coding
RefSeq status
VALIDATED
Organism
Mus musculus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
Also known as
Fam100b; 1110014K08Rik; D030012E24Rik
Summary
Orthologous to human UBALD2 (UBA like domain containing 2). [provided by Alliance of Genome Resources, Apr 2022]
Expression
Ubiquitous expression in duodenum adult (RPKM 169.6), colon adult (RPKM 120.2) and 27 other tissues See more
Orthologs
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Genomic context

See Ubald2 in Genome Data Viewer
Location:
11 E2; 11 81.29 cM
Exon count:
3
Annotation release Status Assembly Chr Location
RS_2024_02 current GRCm39 (GCF_000001635.27) 11 NC_000077.7 (116324920..116329903)
108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 11 NC_000077.6 (116434094..116439077)

Chromosome 11 - NC_000077.7Genomic Context describing neighboring genes Neighboring gene STARR-seq mESC enhancer starr_31198 Neighboring gene forkhead box J1 Neighboring gene ring finger protein 157 Neighboring gene STARR-positive B cell enhancer ABC_E5299 Neighboring gene ribosomal protein S11, pseudogene 2 Neighboring gene STARR-positive B cell enhancer mm9_chr11:116255636-116255937 Neighboring gene STARR-positive B cell enhancer ABC_E9382 Neighboring gene STARR-positive B cell enhancer ABC_E8472 Neighboring gene STARR-positive B cell enhancer ABC_E5300 Neighboring gene STARR-positive B cell enhancer ABC_E10733 Neighboring gene STARR-seq mESC enhancer starr_31202 Neighboring gene STARR-seq mESC enhancer starr_31205 Neighboring gene glutamine rich 2 Neighboring gene phosphoribosyl pyrophosphate synthetase-associated protein 1 Neighboring gene STARR-positive B cell enhancer ABC_E7101 Neighboring gene CapStarr-seq enhancer MGSCv37_chr11:116351868-116352051

Genomic regions, transcripts, and products

Expression

  • Project title: Mouse ENCODE transcriptome data
  • Description: RNA profiling data sets generated by the Mouse ENCODE project.
  • BioProject: PRJNA66167
  • Publication: PMID 25409824
  • Analysis date: n/a

General protein information

Preferred Names
UBA-like domain-containing protein 2
Names
family with sequence similarity 100, member B
protein FAM100B

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_176902.3NP_795876.1  UBA-like domain-containing protein 2

    See identical proteins and their annotated locations for NP_795876.1

    Status: VALIDATED

    Source sequence(s)
    AK050732, AL645861, AW495281, BY734584
    Consensus CDS
    CCDS25666.1
    UniProtKB/Swiss-Prot
    A2AAP1, Q3UMH5, Q8BQH4
    UniProtKB/TrEMBL
    Q14A52
    Related
    ENSMUSP00000058894.7, ENSMUST00000057676.7
    Conserved Domains (1) summary
    cd14343
    Location:1048
    UBA_F100B_like; UBA-like domain found in protein FAM100B

RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCm39 C57BL/6J

Genomic

  1. NC_000077.7 Reference GRCm39 C57BL/6J

    Range
    116324920..116329903
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)