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ZNF843 zinc finger protein 843 [ Homo sapiens (human) ]

Gene ID: 283933, updated on 11-Jun-2021

Summary

Official Symbol
ZNF843provided by HGNC
Official Full Name
zinc finger protein 843provided by HGNC
Primary source
HGNC:HGNC:28710
See related
Ensembl:ENSG00000176723
Gene type
protein coding
RefSeq status
VALIDATED
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Expression
Low expression observed in reference dataset See more
Orthologs
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Genomic context

See ZNF843 in Genome Data Viewer
Location:
16p11.2
Exon count:
3
Annotation release Status Assembly Chr Location
109.20210514 current GRCh38.p13 (GCF_000001405.39) 16 NC_000016.10 (31435434..31443160, complement)
105.20201022 previous assembly GRCh37.p13 (GCF_000001405.25) 16 NC_000016.9 (31446755..31454481, complement)

Chromosome 16 - NC_000016.10Genomic Context describing neighboring genes Neighboring gene integrin subunit alpha D Neighboring gene cytochrome c oxidase subunit 6A2 Neighboring gene armadillo repeat containing 5 Neighboring gene transforming growth factor beta 1 induced transcript 1

Genomic regions, transcripts, and products

Expression

  • Project title: HPA RNA-seq normal tissues
  • Description: RNA-seq was performed of tissue samples from 95 human individuals representing 27 different tissues in order to determine tissue-specificity of all protein-coding genes
  • BioProject: PRJEB4337
  • Publication: PMID 24309898
  • Analysis date: Wed Apr 4 07:08:55 2018

Interactions

Products Interactant Other Gene Complex Source Pubs Description

General gene information

Markers

Homology

Clone Names

  • MGC46336

Gene Ontology Provided by GOA

Function Evidence Code Pubs
enables metal ion binding IEA
Inferred from Electronic Annotation
more info
 
enables protein binding IPI
Inferred from Physical Interaction
more info
PubMed 

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001136509.3NP_001129981.1  zinc finger protein 843

    See identical proteins and their annotated locations for NP_001129981.1

    Status: VALIDATED

    Description
    Transcript Variant: This variant (1) represents the longer transcript. Variants 1 and 2 both encode the same protein.
    Source sequence(s)
    AC026471, AK096248, AK291063, BC036762
    Consensus CDS
    CCDS45471.1
    UniProtKB/Swiss-Prot
    Q8N446
    Related
    ENSP00000322899.5, ENST00000315678.10
    Conserved Domains (2) summary
    sd00017
    Location:3555
    ZF_C2H2; C2H2 Zn finger [structural motif]
    cl26464
    Location:163334
    Atrophin-1; Atrophin-1 family
  2. NM_001353381.1NP_001340310.1  zinc finger protein 843

    Status: VALIDATED

    Description
    Transcript Variant: This variant (2) differs in the 5' UTR compared to isoform 1. Variants 1 and 2 both encode the same protein.
    Source sequence(s)
    BC036762
    Consensus CDS
    CCDS45471.1
    Related
    ENSP00000483573.1, ENST00000618063.1
    Conserved Domains (2) summary
    sd00017
    Location:3555
    ZF_C2H2; C2H2 Zn finger [structural motif]
    cl26464
    Location:163334
    Atrophin-1; Atrophin-1 family

RefSeqs of Annotated Genomes: Homo sapiens Updated Annotation Release 109.20210514

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p13 Primary Assembly

Genomic

  1. NC_000016.10 Reference GRCh38.p13 Primary Assembly

    Range
    31435434..31443160 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
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