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PV06_00469 uncharacterized protein [ Exophiala oligosperma ]

Gene ID: 27352543, updated on 6-Jan-2024

Summary

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Gene symbol
PV06_00469
Gene description
uncharacterized protein
Locus tag
PV06_00469
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Exophiala oligosperma (strain: CBS 72588, nat-host: Homo sapiens)
Lineage
Eukaryota; Fungi; Dikarya; Ascomycota; Pezizomycotina; Eurotiomycetes; Chaetothyriomycetidae; Chaetothyriales; Herpotrichiellaceae; Exophiala
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Genomic context

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Location:
chromosome: Unknown
Exon count:
2

NW_015622818.1Genomic Context describing neighboring genes Neighboring gene uncharacterized protein Neighboring gene uncharacterized protein Neighboring gene uncharacterized protein Neighboring gene uncharacterized protein Neighboring gene hypothetical protein;uncharacterized protein

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_015622818.1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables RNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables nuclease activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in mRNA catabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in regulatory ncRNA-mediated gene silencing IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of RISC complex IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in cytosol IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
uncharacterized protein

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NW_015622818.1 Reference assembly

    Range
    1377471..1380707
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_016400970.1 → XP_016268023.1  uncharacterized protein PV06_00469 [Exophiala oligosperma]

    Status: PROVISIONAL

    UniProtKB/TrEMBL
    A0A0D2CD17
    Conserved Domains (5) summary
    cd04508
    Location:699 → 747
    TUDOR; Tudor domains are found in many eukaryotic organisms and have been implicated in protein-protein interactions in which methylated protein substrates bind to these domains. For example, the Tudor domain of Survival of Motor Neuron (SMN) binds to ...
    smart00318
    Location:478 → 611
    SNc; Staphylococcal nuclease homologues
    cd00175
    Location:486 → 611
    SNc; Staphylococcal nuclease homologues. SNase homologues are found in bacteria, archaea, and eukaryotes. They contain no disufide bonds.
    pfam00567
    Location:641 → 768
    TUDOR; Tudor domain
    cl00140
    Location:320 → 448
    SNc; Staphylococcal nuclease homologues. SNase homologues are found in bacteria, archaea, and eukaryotes. They contain no disufide bonds.
Nucleotide Protein
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