3BDL,3BDL,1NSN


Conserved Protein Domain Family
SNc

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smart00318: SNc 
Click on image for an interactive view with Cn3D
Staphylococcal nuclease homologues
Statistics
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PSSM-Id: 214615
Aligned: 35 rows
Threshold Bit Score: 108.888
Created: 12-Jul-2011
Updated: 2-Oct-2020
Structure
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Program:
Drawing:
Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
3BDL_A        207 GRSEAVVEYVFSGSRLKLYLPKetCLITFLLAGIECPRGARNLPGlv------------qeGEPFSEEATLFTKELV-LQ 273  human
Q52928         45 AEPIIGQASVIDGDTIEIA------GERVQLNSVDAPEEWQVCLDer------------gaDYRCGKESASALDAFLsAS 106  Sinorhizobium...
O58971         30 KELHGKVIKVVDGDTLYVKLDDg-EVVKVRLVGVDAPELEEGLMRpgeypg----ihnmtcLIKYGELAKEFLKNIT-LG 103  Pyrococcus ho...
O66926         19 ELIPCKVVRVVDGDTFRCVPEGksRFIKVRLMGIDTLETNNMKKGmgqakwf---yggirtVKEFGKKAKEFSKRLI-DK 94   Aquifex aeolicus
YP_788098      22 ADIHGRVVRVLDGDTIEVMDSR--KAVRIRLVNIDAPEKK----------------------QDYGRWSTDMMKSLV-AG 76   Escherichia coli
NP_439447      17 EKNTCRVVKISDGDTLTC-LTKgnKSIKVRLAEIDAPEKS----------------------QAFGQKSKKTLSDLV-YQ 72   Haemophilus i...
YP_001911186   25 ADFRGEVVRILDGDTIDVLVNR--QTIRVRLADIDAPES----------------------GQAFGSRARQRLADLT-FR 79   Salmonella en...
P22997        130 AELRGEVVRIIDGDTIDVLVDK--QPVRVRLVDIDAPEKR----------------------QAFGERARQALAGMV-FR 184  Escherichia coli
NP_248443      53 EHYYGKVVKVVDGDTVYVEVNGe--LWKIRLLGVDTPEIHKRNNPyeyyllngtpitdtkyLKEWGYKAKHFAEKEL-KN 129  Methanocaldoc...
NP_388800     376 GEYEGIVDRVVDGDTIHLKSPVl-gTTKIRFVNVDAPETYHTPKNdad-----------enQLRFGKKASDYLKTVL-SP 442  Bacillus subt...
3BDL_A        274 RE---VEVEVES----MDKAGNFIGW---LHIDGAn---------LSVLLVEHALSKVHFTAERSSYy--KSLLSAEEAA 332  human
Q52928        107 RP---TRCEFAG----RDRYGRFVGT---CFRADGk--------dVNRWLIESGNAVDRDTDNKGL------YASAQQTA 162  Sinorhizobium...
O58971        104 KS---VTLEFDSiqgrKDKYGRLLVY---MYLNGTd---------INAELIKMGFARVFYEKRFEKIk---eYSKLEDDA 165  Pyrococcus ho...
O66926         95 KV---VYLELPVr--kMDNNGRYLAY---VWLDEYrn------kmLNLLLVKEGLAFVFIIPPQVKYl--KELGEAQEEA 158  Aquifex aeolicus
YP_788098      77 KT---VTVTYFQ----RDRYGRILGQ---VYAPDGm--------nVNQFMVRAGAAWVYEQYNTDPV-----LPVLQNEA 133  Escherichia coli
NP_439447      73 KN---VRLARKG----KDRYQRTLAV---VYYQKQn---------INLEMVKQGMAWAYKQYSHDPI-----YLQAQENA 128  Haemophilus i...
YP_001911186   80 QE---VQVTEKE----VDRYGRTLGV---VYAPLQypggqtqltnINAIMVQEGMAWAYRYYGKpt---dAQMYEYEKEA 146  Salmonella en...
P22997        185 RH---VLVDEKD----TDRYGRTLGT---VWVNMElasrppqprnVNAAMVHQGMAWAYRFHGRAADpe---mLRLEQEA 251  Escherichia coli
NP_248443     130 KT---VIIVFDNeapkKDKYGRYLAYifiNNSNNLi--------nFNEELLKYGYARVYI----SNFelkDEFLNVEREA 194  Methanocaldoc...
NP_388800     443 GDkitVKVGSEA----KDSYGRLLGQ---VITESGs--------nVNLELVKNGYAPTYFIWPVDNEedyQQFQAAVAAA 507  Bacillus subt...
3BDL_A        333 KQKKEKVWAH 342  human
Q52928        163 KSNGAGIWRA 172  Sinorhizobium meliloti
O58971        166 RKRRLNLWSC 175  Pyrococcus horikoshii
O66926        159 YKDRRGFWKY 168  Aquifex aeolicus
YP_788098     134 RQQKRGLWSD 143  Escherichia coli
NP_439447     129 QAKGIGLWAD 138  Haemophilus influenzae Rd KW20
YP_001911186  147 RRQRLGLWSD 156  Salmonella enterica subsp. enterica serovar Dublin
P22997        252 RGKRVGLWSD 261  Escherichia coli
NP_248443     195 KENRVGLWNW 204  Methanocaldococcus jannaschii DSM 2661
NP_388800     508 KKDQKGIWNE 517  Bacillus subtilis subsp. subtilis str. 168
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