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TP53TG5 TP53 target 5 [ Homo sapiens (human) ]

Gene ID: 27296, updated on 5-Jan-2022

Summary

Official Symbol
TP53TG5provided by HGNC
Official Full Name
TP53 target 5provided by HGNC
Primary source
HGNC:HGNC:15856
See related
Ensembl:ENSG00000124251 MIM:617316
Gene type
protein coding
RefSeq status
VALIDATED
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Also known as
CLG01; C20orf10
Summary
Located in chromosome and nucleolus. [provided by Alliance of Genome Resources, Nov 2021]
Expression
Biased expression in testis (RPKM 14.6) and brain (RPKM 1.1) See more
Orthologs
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Genomic context

See TP53TG5 in Genome Data Viewer
Location:
20q13.12
Exon count:
5
Annotation release Status Assembly Chr Location
109.20211119 current GRCh38.p13 (GCF_000001405.39) 20 NC_000020.11 (45372557..45378550, complement)
105.20201022 previous assembly GRCh37.p13 (GCF_000001405.25) 20 NC_000020.10 (44001197..44006965, complement)

Chromosome 20 - NC_000020.11Genomic Context describing neighboring genes Neighboring gene tRNA-Val (anticodon CAC) 14-1 Neighboring gene syndecan 4 Neighboring gene SYS1-DBNDD2 readthrough (NMD candidate) Neighboring gene SYS1 golgi trafficking protein Neighboring gene NADH:ubiquinone oxidoreductase subunit B4 pseudogene 10 Neighboring gene uncharacterized LOC107985404 Neighboring gene dysbindin domain containing 2

Genomic regions, transcripts, and products

Expression

  • Project title: HPA RNA-seq normal tissues
  • Description: RNA-seq was performed of tissue samples from 95 human individuals representing 27 different tissues in order to determine tissue-specificity of all protein-coding genes
  • BioProject: PRJEB4337
  • Publication: PMID 24309898
  • Analysis date: Wed Apr 4 07:08:55 2018

Interactions

Products Interactant Other Gene Complex Source Pubs Description

General gene information

Markers

Homology

Gene Ontology Provided by GOA

Function Evidence Code Pubs
enables molecular_function ND
No biological Data available
more info
 
enables protein binding IPI
Inferred from Physical Interaction
more info
PubMed 
Process Evidence Code Pubs
involved_in intracellular signal transduction NAS
Non-traceable Author Statement
more info
PubMed 
involved_in negative regulation of cell growth NAS
Non-traceable Author Statement
more info
PubMed 
Component Evidence Code Pubs
located_in chromosome IDA
Inferred from Direct Assay
more info
 
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
 
located_in nucleolus IDA
Inferred from Direct Assay
more info
 
located_in nucleus HDA PubMed 

General protein information

Preferred Names
TP53-target gene 5 protein
Names
TP53-inducible gene 5 protein

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_014477.3NP_055292.1  TP53-target gene 5 protein

    See identical proteins and their annotated locations for NP_055292.1

    Status: VALIDATED

    Source sequence(s)
    AB017802, AL021578, BC036785
    Consensus CDS
    CCDS13352.1
    UniProtKB/Swiss-Prot
    Q9Y2B4
    Related
    ENSP00000361811.3, ENST00000372726.5
    Conserved Domains (1) summary
    pfam15331
    Location:28247
    TP53IP5; Cellular tumor antigen p53-inducible 5

RefSeqs of Annotated Genomes: Homo sapiens Updated Annotation Release 109.20211119

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p13 Primary Assembly

Genomic

  1. NC_000020.11 Reference GRCh38.p13 Primary Assembly

    Range
    45372557..45378550 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_011528790.2XP_011527092.1  TP53-target gene 5 protein isoform X1

    See identical proteins and their annotated locations for XP_011527092.1

    Conserved Domains (1) summary
    pfam15331
    Location:12231
    TP53IP5; Cellular tumour antigen p53-inducible 5
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