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CFAP126 cilia and flagella associated protein 126 [ Homo sapiens (human) ]

Gene ID: 257177, updated on 22-Jan-2020

Summary

Official Symbol
CFAP126provided by HGNC
Official Full Name
cilia and flagella associated protein 126provided by HGNC
Primary source
HGNC:HGNC:32325
See related
Ensembl:ENSG00000188931 MIM:616119
Gene type
protein coding
RefSeq status
VALIDATED
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Also known as
Fltp; Flattop; C1orf192
Expression
Ubiquitous expression in liver (RPKM 108.4), fat (RPKM 105.1) and 25 other tissues See more
Orthologs

Genomic context

See CFAP126 in Genome Data Viewer
Location:
1q23.3
Exon count:
5
Annotation release Status Assembly Chr Location
109.20191205 current GRCh38.p13 (GCF_000001405.39) 1 NC_000001.11 (161364733..161367876, complement)
105 previous assembly GRCh37.p13 (GCF_000001405.25) 1 NC_000001.10 (161334521..161337673, complement)

Chromosome 1 - NC_000001.11Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC107985221 Neighboring gene myelin protein zero Neighboring gene succinate dehydrogenase complex subunit C Neighboring gene ribonucleotide reductase M2 polypeptide pseudogene 2 Neighboring gene tRNA-Val (anticodon CAC) 1-1

Genomic regions, transcripts, and products

Expression

  • Project title: HPA RNA-seq normal tissues
  • Description: RNA-seq was performed of tissue samples from 95 human individuals representing 27 different tissues in order to determine tissue-specificity of all protein-coding genes
  • BioProject: PRJEB4337
  • Publication: PMID 24309898
  • Analysis date: Wed Apr 4 07:08:55 2018

General gene information

Markers

Homology

Gene Ontology Provided by GOA

Process Evidence Code Pubs
cilium organization IBA
Inferred from Biological aspect of Ancestor
more info
PubMed 
cilium organization ISS
Inferred from Sequence or Structural Similarity
more info
 
Component Evidence Code Pubs
apical plasma membrane ISS
Inferred from Sequence or Structural Similarity
more info
 
ciliary basal body IBA
Inferred from Biological aspect of Ancestor
more info
PubMed 
ciliary basal body ISS
Inferred from Sequence or Structural Similarity
more info
 
cilium ISS
Inferred from Sequence or Structural Similarity
more info
 
cytoplasm IEA
Inferred from Electronic Annotation
more info
 

General protein information

Preferred Names
protein Flattop
Names
UPF0740 protein C1orf192

NCBI Reference Sequences (RefSeq)

RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001013625.4NP_001013647.2  protein Flattop

    See identical proteins and their annotated locations for NP_001013647.2

    Status: VALIDATED

    Source sequence(s)
    AL592295
    Consensus CDS
    CCDS30921.1
    UniProtKB/Swiss-Prot
    Q5VTH2
    Related
    ENSP00000356951.1, ENST00000367974.2

RefSeqs of Annotated Genomes: Homo sapiens Updated Annotation Release 109.20191205

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p13 Primary Assembly

Genomic

  1. NC_000001.11 Reference GRCh38.p13 Primary Assembly

    Range
    161364733..161367876 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
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