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NATD1 N-acetyltransferase domain containing 1 [ Homo sapiens (human) ]

Gene ID: 256302, updated on 21-Dec-2019

Summary

Official Symbol
NATD1provided by HGNC
Official Full Name
N-acetyltransferase domain containing 1provided by HGNC
Primary source
HGNC:HGNC:30770
See related
Ensembl:ENSG00000274180
Gene type
protein coding
RefSeq status
VALIDATED
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Also known as
Gtlf3b; C17orf103
Expression
Ubiquitous expression in fat (RPKM 12.3), bone marrow (RPKM 8.0) and 24 other tissues See more
Orthologs

Genomic context

See NATD1 in Genome Data Viewer
Location:
17p11.2
Exon count:
3
Annotation release Status Assembly Chr Location
109.20191205 current GRCh38.p13 (GCF_000001405.39) 17 NC_000017.11 (21238870..21253410, complement)
105 previous assembly GRCh37.p13 (GCF_000001405.25) 17 NC_000017.10 (21142183..21156578, complement)

Chromosome 17 - NC_000017.11Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC107984969 Neighboring gene RNA, 7SL, cytoplasmic 426, pseudogene Neighboring gene eukaryotic translation initiation factor 1 pseudogene 5 Neighboring gene mitogen-activated protein kinase kinase 3

Genomic regions, transcripts, and products

Expression

  • Project title: HPA RNA-seq normal tissues
  • Description: RNA-seq was performed of tissue samples from 95 human individuals representing 27 different tissues in order to determine tissue-specificity of all protein-coding genes
  • BioProject: PRJEB4337
  • Publication: PMID 24309898
  • Analysis date: Wed Apr 4 07:08:55 2018

Interactions

Products Interactant Other Gene Complex Source Pubs Description

General gene information

Markers

Potential readthrough

Included gene: TMEM11

Homology

Clone Names

  • MGC33894, DKFZp762H185, DKFZp761I1115

Gene Ontology Provided by GOA

Function Evidence Code Pubs
protein binding IPI
Inferred from Physical Interaction
more info
PubMed 

General protein information

Preferred Names
protein NATD1
Names
N-acetyltransferase domain-containing protein 1
gene trap locus F3b
protein GTLF3B
transcript expressed during hematopoiesis 2

NCBI Reference Sequences (RefSeq)

RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_152914.3NP_690878.2  protein NATD1

    See identical proteins and their annotated locations for NP_690878.2

    Status: VALIDATED

    Source sequence(s)
    AC087294, AK126856
    UniProtKB/Swiss-Prot
    Q8N6N6
    Related
    ENSP00000478388.1, ENST00000611551.1
    Conserved Domains (1) summary
    pfam14542
    Location:29103
    Acetyltransf_CG; GCN5-related N-acetyl-transferase

RefSeqs of Annotated Genomes: Homo sapiens Updated Annotation Release 109.20191205

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p13 Primary Assembly

Genomic

  1. NC_000017.11 Reference GRCh38.p13 Primary Assembly

    Range
    21238870..21253410 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
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