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Lonrf1 LON peptidase N-terminal domain and ring finger 1 [ Mus musculus (house mouse) ]

Gene ID: 244421, updated on 7-Apr-2025

Summary

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Official Symbol
Lonrf1provided by MGI
Official Full Name
LON peptidase N-terminal domain and ring finger 1provided by MGI
Primary source
MGI:MGI:3609241
See related
Ensembl:ENSMUSG00000039633 AllianceGenome:MGI:3609241
Gene type
protein coding
RefSeq status
VALIDATED
Organism
Mus musculus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
Summary
Predicted to enable metal ion binding activity. Predicted to be located in cytoplasm. Orthologous to human LONRF1 (LON peptidase N-terminal domain and ring finger 1). [provided by Alliance of Genome Resources, Apr 2025]
Expression
Ubiquitous expression in bladder adult (RPKM 7.0), ovary adult (RPKM 5.3) and 28 other tissues See more
Orthologs
human all
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Genomic context

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See Lonrf1 in Genome Data Viewer
Location:
8 A4; 8 23.05 cM
Exon count:
12
Annotation release Status Assembly Chr Location
RS_2024_02 current GRCm39 (GCF_000001635.27) 8 NC_000074.7 (36683216..36716513, complement)
108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 8 NC_000074.6 (36216062..36249359, complement)

Chromosome 8 - NC_000074.7Genomic Context describing neighboring genes Neighboring gene STARR-positive B cell enhancer ABC_E2862 Neighboring gene predicted gene, 39164 Neighboring gene predicted gene, 35520 Neighboring gene predicted gene, 39165 Neighboring gene STARR-seq mESC enhancer starr_21210 Neighboring gene predicted gene, 35712 Neighboring gene STARR-seq mESC enhancer starr_21211 Neighboring gene STARR-seq mESC enhancer starr_21212 Neighboring gene glyceraldehyde-3-phosphate dehydrogenase pseudogene Neighboring gene predicted gene, 26150

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Expression

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  • Project title: Mouse ENCODE transcriptome data
  • Description: RNA profiling data sets generated by the Mouse ENCODE project.
  • BioProject: PRJNA66167
  • Publication: PMID 25409824
  • Analysis date: n/a

Bibliography

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Related articles in PubMed

  1. Transcriptomic characterization of Lonrf1 at the single-cell level under pathophysiological conditions. Li D, et al. J Biochem, 2023 May 29. PMID 36888978, Free PMC Article
  2. Homologous Transcription Factors DUX4 and DUX4c Associate with Cytoplasmic Proteins during Muscle Differentiation. Ansseau E, et al. PLoS One, 2016. PMID 26816005, Free PMC Article
  3. BayGenomics: a resource of insertional mutations in mouse embryonic stem cells. Stryke D, et al. Nucleic Acids Res, 2003 Jan 1. PMID 12520002, Free PMC Article
  4. A high-resolution anatomical atlas of the transcriptome in the mouse embryo. Diez-Roux G, et al. PLoS Biol, 2011 Jan 18. PMID 21267068, Free PMC Article
  5. Antisense transcription in the mammalian transcriptome. Katayama S, et al. Science, 2005 Sep 2. PMID 16141073

See all (13) citations in PubMed

GeneRIFs: Gene References Into Functions

What's a GeneRIF?
  1. Transcriptomic characterization of Lonrf1 at the single-cell level under pathophysiological conditions.
    Title: Transcriptomic characterization of Lonrf1 at the single-cell level under pathophysiological conditions.
Submit: New GeneRIF Correction

Interactions

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Products Interactant Other Gene Complex Source Pubs Description

General gene information

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Markers

Homology

Gene Ontology Provided by MGI

Function Evidence Code Pubs
enables zinc ion binding IEA
Inferred from Electronic Annotation
more info
  
Component Evidence Code Pubs
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
  

General protein information

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Preferred Names
LON peptidase N-terminal domain and RING finger protein 1

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001081150.2 → NP_001074619.2  LON peptidase N-terminal domain and RING finger protein 1

    Status: VALIDATED

    Source sequence(s)
    AC153007
    Consensus CDS
    CCDS40321.2
    UniProtKB/Swiss-Prot
    D3YY23
    UniProtKB/TrEMBL
    A0A182DWE6
    Related
    ENSMUSP00000158932.2, ENSMUST00000239119.2

RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCm39 C57BL/6J

Genomic

  1. NC_000074.7 Reference GRCm39 C57BL/6J

    Range
    36683216..36716513 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
Nucleotide Protein Strain
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
D3YY23.2 GenPept UniProtKB/Swiss-Prot:D3YY23

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

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