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Lonrf1 LON peptidase N-terminal domain and ring finger 1 [ Mus musculus (house mouse) ]

Gene ID: 244421, updated on 5-Mar-2024

Summary

Official Symbol
Lonrf1provided by MGI
Official Full Name
LON peptidase N-terminal domain and ring finger 1provided by MGI
Primary source
MGI:MGI:3609241
See related
Ensembl:ENSMUSG00000039633 AllianceGenome:MGI:3609241
Gene type
protein coding
RefSeq status
VALIDATED
Organism
Mus musculus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
Summary
Predicted to enable metal ion binding activity. Orthologous to human LONRF1 (LON peptidase N-terminal domain and ring finger 1). [provided by Alliance of Genome Resources, Apr 2022]
Expression
Ubiquitous expression in bladder adult (RPKM 7.0), ovary adult (RPKM 5.3) and 28 other tissues See more
Orthologs
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Genomic context

See Lonrf1 in Genome Data Viewer
Location:
8 A4; 8 23.05 cM
Exon count:
12
Annotation release Status Assembly Chr Location
RS_2024_02 current GRCm39 (GCF_000001635.27) 8 NC_000074.7 (36683216..36716513, complement)
108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 8 NC_000074.6 (36216062..36249359, complement)

Chromosome 8 - NC_000074.7Genomic Context describing neighboring genes Neighboring gene STARR-positive B cell enhancer ABC_E2862 Neighboring gene predicted gene, 39164 Neighboring gene predicted gene, 35520 Neighboring gene predicted gene, 39165 Neighboring gene STARR-seq mESC enhancer starr_21210 Neighboring gene predicted gene, 35712 Neighboring gene STARR-seq mESC enhancer starr_21211 Neighboring gene STARR-seq mESC enhancer starr_21212 Neighboring gene glyceraldehyde-3-phosphate dehydrogenase pseudogene Neighboring gene predicted gene, 26150

Genomic regions, transcripts, and products

Expression

  • Project title: Mouse ENCODE transcriptome data
  • Description: RNA profiling data sets generated by the Mouse ENCODE project.
  • BioProject: PRJNA66167
  • Publication: PMID 25409824
  • Analysis date: n/a

Interactions

Products Interactant Other Gene Complex Source Pubs Description

General protein information

Preferred Names
LON peptidase N-terminal domain and RING finger protein 1

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001081150.2NP_001074619.2  LON peptidase N-terminal domain and RING finger protein 1

    Status: VALIDATED

    Source sequence(s)
    AC153007
    Consensus CDS
    CCDS40321.2
    UniProtKB/Swiss-Prot
    D3YY23
    UniProtKB/TrEMBL
    A0A182DWE6
    Related
    ENSMUSP00000158932.2, ENSMUST00000239119.2

RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCm39 C57BL/6J

Genomic

  1. NC_000074.7 Reference GRCm39 C57BL/6J

    Range
    36683216..36716513 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)