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Hcar1 hydrocarboxylic acid receptor 1 [ Mus musculus (house mouse) ]

Gene ID: 243270, updated on 31-Oct-2021

Summary

Official Symbol
Hcar1provided by MGI
Official Full Name
hydrocarboxylic acid receptor 1provided by MGI
Primary source
MGI:MGI:2441671
See related
Ensembl:ENSMUSG00000049241
Gene type
protein coding
RefSeq status
VALIDATED
Organism
Mus musculus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
Also known as
Gpr81
Orthologs
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Genomic context

See Hcar1 in Genome Data Viewer
Location:
5; 5 F
Exon count:
1
Annotation release Status Assembly Chr Location
109 current GRCm39 (GCF_000001635.27) 5 NC_000071.7 (124014802..124018066, complement)
108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 5 NC_000071.6 (123876739..123880003, complement)
Build 37.2 previous assembly MGSCv37 (GCF_000001635.18) 5 NC_000071.5 (124326745..124330029, complement)

Chromosome 5 - NC_000071.7Genomic Context describing neighboring genes Neighboring gene kinetochore associated 1 Neighboring gene hydroxycarboxylic acid receptor 2 Neighboring gene density-regulated protein Neighboring gene coiled-coil domain containing 62

Genomic regions, transcripts, and products

Bibliography

GeneRIFs: Gene References Into Functions

What's a GeneRIF?

Variation

Alleles

Alleles of this type are documented at Mouse Genome Informatics  (MGI)
  • Targeted (1)  1 citation
  • Endonuclease-mediated (1) 

General gene information

Markers

Homology

Gene Ontology Provided by MGI

Function Evidence Code Pubs
enables G protein-coupled receptor activity IDA
Inferred from Direct Assay
more info
PubMed 
Component Evidence Code Pubs
located_in integral component of membrane IEA
Inferred from Electronic Annotation
more info
 
located_in intracellular organelle ISO
Inferred from Sequence Orthology
more info
PubMed 
is_active_in membrane IDA
Inferred from Direct Assay
more info
PubMed 
located_in plasma membrane ISO
Inferred from Sequence Orthology
more info
PubMed 

General protein information

Preferred Names
hydroxycarboxylic acid receptor 1
Names
G-protein coupled receptor 81

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_175520.5NP_780729.3  hydroxycarboxylic acid receptor 1

    Status: VALIDATED

    Source sequence(s)
    AC122753, AC129582
    Consensus CDS
    CCDS19669.2
    Related
    ENSMUSP00000129280.2, ENSMUST00000164267.2
    Conserved Domains (1) summary
    cd15201
    Location:16289
    7tmA_HCAR1-3; hydroxycarboxylic acid receptors, member of the class A family of seven-transmembrane G protein-coupled receptors

RefSeqs of Annotated Genomes: Mus musculus Annotation Release 109 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCm39 C57BL/6J

Genomic

  1. NC_000071.7 Reference GRCm39 C57BL/6J

    Range
    124014802..124018066 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
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