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Gatad2a GATA zinc finger domain containing 2A [ Mus musculus (house mouse) ]

Gene ID: 234366, updated on 7-Feb-2023

Summary

Official Symbol
Gatad2aprovided by MGI
Official Full Name
GATA zinc finger domain containing 2Aprovided by MGI
Primary source
MGI:MGI:2384585
See related
Ensembl:ENSMUSG00000036180 AllianceGenome:MGI:2384585
Gene type
protein coding
RefSeq status
VALIDATED
Organism
Mus musculus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
Also known as
1110066C11Rik
Summary
Predicted to enable protein-macromolecule adaptor activity. Acts upstream of or within several processes, including blood vessel development; chordate embryonic development; and embryonic body morphogenesis. Predicted to be located in nucleoplasm. Predicted to be part of NuRD complex. Is expressed in brain and enteric nervous system. Orthologous to human GATAD2A (GATA zinc finger domain containing 2A). [provided by Alliance of Genome Resources, Apr 2022]
Expression
Ubiquitous expression in adrenal adult (RPKM 31.4), ovary adult (RPKM 26.7) and 28 other tissues See more
Orthologs
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Genomic context

See Gatad2a in Genome Data Viewer
Location:
8; 8 B3.3
Exon count:
16
Annotation release Status Assembly Chr Location
109 current GRCm39 (GCF_000001635.27) 8 NC_000074.7 (70359719..70450093, complement)
108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 8 NC_000074.6 (69907069..69996402, complement)

Chromosome 8 - NC_000074.7Genomic Context describing neighboring genes Neighboring gene predicted gene, 33746 Neighboring gene YjeF N-terminal domain containing 3 Neighboring gene NADH:ubiquinone oxidoreductase subunit A13 Neighboring gene testis-specific serine kinase 6 Neighboring gene nucleoside diphosphate kinase B pseudogene Neighboring gene MAU2 sister chromatid cohesion factor

Genomic regions, transcripts, and products

Expression

  • Project title: Mouse ENCODE transcriptome data
  • Description: RNA profiling data sets generated by the Mouse ENCODE project.
  • BioProject: PRJNA66167
  • Publication: PMID 25409824
  • Analysis date: n/a

Bibliography

Variation

Alleles

Alleles of this type are documented at Mouse Genome Informatics  (MGI)
  • Targeted (1)  1 citation
  • Endonuclease-mediated (1) 

Pathways from PubChem

Interactions

Products Interactant Other Gene Complex Source Pubs Description

General gene information

Markers

Homology

Clone Names

  • MGC29315, MGC36975

Gene Ontology Provided by MGI

Function Evidence Code Pubs
enables metal ion binding IEA
Inferred from Electronic Annotation
more info
 
enables protein-macromolecule adaptor activity ISO
Inferred from Sequence Orthology
more info
 
Process Evidence Code Pubs
acts_upstream_of_or_within anterior neuropore closure IMP
Inferred from Mutant Phenotype
more info
PubMed 
acts_upstream_of_or_within blood vessel development IMP
Inferred from Mutant Phenotype
more info
PubMed 
involved_in chromatin remodeling ISO
Inferred from Sequence Orthology
more info
 
acts_upstream_of_or_within embryonic body morphogenesis IMP
Inferred from Mutant Phenotype
more info
PubMed 
involved_in histone deacetylation ISO
Inferred from Sequence Orthology
more info
 
acts_upstream_of_or_within in utero embryonic development IMP
Inferred from Mutant Phenotype
more info
PubMed 
involved_in negative regulation of DNA-templated transcription ISO
Inferred from Sequence Orthology
more info
 
involved_in negative regulation of DNA-templated transcription NAS
Non-traceable Author Statement
more info
PubMed 
involved_in negative regulation of transcription by RNA polymerase II IBA
Inferred from Biological aspect of Ancestor
more info
PubMed 
acts_upstream_of_or_within neural fold formation IMP
Inferred from Mutant Phenotype
more info
PubMed 
involved_in positive regulation of DNA-templated transcription NAS
Non-traceable Author Statement
more info
PubMed 
acts_upstream_of_or_within programmed cell death IMP
Inferred from Mutant Phenotype
more info
PubMed 
involved_in regulation of cell fate specification NAS
Non-traceable Author Statement
more info
PubMed 
involved_in regulation of stem cell differentiation NAS
Non-traceable Author Statement
more info
PubMed 
Component Evidence Code Pubs
part_of NuRD complex IBA
Inferred from Biological aspect of Ancestor
more info
PubMed 
part_of NuRD complex ISO
Inferred from Sequence Orthology
more info
 
part_of NuRD complex NAS
Non-traceable Author Statement
more info
PubMed 
located_in nucleoplasm ISO
Inferred from Sequence Orthology
more info
 
located_in nucleus ISO
Inferred from Sequence Orthology
more info
 

General protein information

Preferred Names
transcriptional repressor p66 alpha
Names
GATA zinc finger domain-containing protein 2A

NCBI Reference Sequences (RefSeq)

NEW Try the new Transcript table

RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001113346.1NP_001106817.1  transcriptional repressor p66 alpha isoform b

    See identical proteins and their annotated locations for NP_001106817.1

    Status: VALIDATED

    Description
    Transcript Variant: This variant (3) differs in the 5' UTR and uses an alternate in-frame splice site in the 3' coding region, compared to variant 1. This results in a shorter protein (isoform b), compared to isoform a.
    Source sequence(s)
    AC158564, BQ571528, CF726663, CJ166913, CN666280, CV562594, DV651557
    Consensus CDS
    CCDS52567.1
    UniProtKB/Swiss-Prot
    Q8CHY6, Q8VEC9
    Related
    ENSMUSP00000112164.3, ENSMUST00000116463.4
    Conserved Domains (2) summary
    pfam16563
    Location:133169
    P66_CC; Coiled-coil and interaction region of P66A and P66B with MBD2
    cl29608
    Location:416448
    ZnF_GATA; Zinc finger DNA binding domain; binds specifically to DNA consensus sequence [AT]GATA[AG] promoter elements; a subset of family members may also bind protein; zinc-finger consensus topology is C-X(2)-C-X(17)-C-X(2)-C
  2. NM_001286450.1NP_001273379.1  transcriptional repressor p66 alpha isoform d

    Status: VALIDATED

    Description
    Transcript Variant: This variant (4) uses several alternate splice sites, one of which results in a frameshift, compared to variant 1. This results in a longer protein (isoform d) with a distinct C-terminus, compared to isoform a.
    Source sequence(s)
    AK083473, AK148968, AK160058
    Related
    ENSMUSP00000137386.3, ENSMUST00000177851.9
    Conserved Domains (2) summary
    pfam16563
    Location:133169
    P66_CC; Coiled-coil and interaction region of P66A and P66B with MBD2
    cl00158
    Location:419452
    ZnF_GATA; Zinc finger DNA binding domain; binds specifically to DNA consensus sequence [AT]GATA[AG] promoter elements; a subset of family members may also bind protein; zinc-finger consensus topology is C-X(2)-C-X(17)-C-X(2)-C
  3. NM_145596.4NP_663571.2  transcriptional repressor p66 alpha isoform a

    Status: VALIDATED

    Description
    Transcript Variant: This variant (1) represents the longest transcript. It encodes isoform a.
    Source sequence(s)
    AK083473, AK148968, AK160058, CA317226
    Consensus CDS
    CCDS22355.1
    UniProtKB/TrEMBL
    E9QMN5
    Related
    ENSMUSP00000070229.5, ENSMUST00000065169.12
    Conserved Domains (2) summary
    pfam16563
    Location:133169
    P66_CC; Coiled-coil and interaction region of P66A and P66B with MBD2
    cl29608
    Location:417450
    ZnF_GATA; Zinc finger DNA binding domain; binds specifically to DNA consensus sequence [AT]GATA[AG] promoter elements; a subset of family members may also bind protein; zinc-finger consensus topology is C-X(2)-C-X(17)-C-X(2)-C

RefSeqs of Annotated Genomes: Mus musculus Annotation Release 109 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCm39 C57BL/6J

Genomic

  1. NC_000074.7 Reference GRCm39 C57BL/6J

    Range
    70359719..70450093 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_017312722.3XP_017168211.1  transcriptional repressor p66 alpha isoform X16

    Conserved Domains (2) summary
    pfam16563
    Location:133169
    P66_CC; Coiled-coil and interaction region of P66A and P66B with MBD2
    cl29608
    Location:415448
    ZnF_GATA; Zinc finger DNA binding domain; binds specifically to DNA consensus sequence [AT]GATA[AG] promoter elements; a subset of family members may also bind protein; zinc-finger consensus topology is C-X(2)-C-X(17)-C-X(2)-C
  2. XM_030243469.2XP_030099329.1  transcriptional repressor p66 alpha isoform X8

    Conserved Domains (2) summary
    pfam16563
    Location:133169
    P66_CC; Coiled-coil and interaction region of P66A and P66B with MBD2
    cl29608
    Location:415448
    ZnF_GATA; Zinc finger DNA binding domain; binds specifically to DNA consensus sequence [AT]GATA[AG] promoter elements; a subset of family members may also bind protein; zinc-finger consensus topology is C-X(2)-C-X(17)-C-X(2)-C
  3. XM_017312721.3XP_017168210.1  transcriptional repressor p66 alpha isoform X14

    Conserved Domains (2) summary
    pfam16563
    Location:133169
    P66_CC; Coiled-coil and interaction region of P66A and P66B with MBD2
    cl29608
    Location:416448
    ZnF_GATA; Zinc finger DNA binding domain; binds specifically to DNA consensus sequence [AT]GATA[AG] promoter elements; a subset of family members may also bind protein; zinc-finger consensus topology is C-X(2)-C-X(17)-C-X(2)-C
  4. XM_017312720.3XP_017168209.1  transcriptional repressor p66 alpha isoform X13

    Conserved Domains (2) summary
    pfam16563
    Location:133169
    P66_CC; Coiled-coil and interaction region of P66A and P66B with MBD2
    cl29608
    Location:417449
    ZnF_GATA; Zinc finger DNA binding domain; binds specifically to DNA consensus sequence [AT]GATA[AG] promoter elements; a subset of family members may also bind protein; zinc-finger consensus topology is C-X(2)-C-X(17)-C-X(2)-C
  5. XM_030243470.2XP_030099330.1  transcriptional repressor p66 alpha isoform X10

    Conserved Domains (2) summary
    pfam16563
    Location:133169
    P66_CC; Coiled-coil and interaction region of P66A and P66B with MBD2
    cl29608
    Location:419452
    ZnF_GATA; Zinc finger DNA binding domain; binds specifically to DNA consensus sequence [AT]GATA[AG] promoter elements; a subset of family members may also bind protein; zinc-finger consensus topology is C-X(2)-C-X(17)-C-X(2)-C
  6. XM_030243471.2XP_030099331.1  transcriptional repressor p66 alpha isoform X11

    Conserved Domains (2) summary
    pfam16563
    Location:133169
    P66_CC; Coiled-coil and interaction region of P66A and P66B with MBD2
    cl29608
    Location:419451
    ZnF_GATA; Zinc finger DNA binding domain; binds specifically to DNA consensus sequence [AT]GATA[AG] promoter elements; a subset of family members may also bind protein; zinc-finger consensus topology is C-X(2)-C-X(17)-C-X(2)-C
  7. XM_006509636.5XP_006509699.1  transcriptional repressor p66 alpha isoform X3

    Conserved Domains (2) summary
    pfam16563
    Location:133169
    P66_CC; Coiled-coil and interaction region of P66A and P66B with MBD2
    cl29608
    Location:419451
    ZnF_GATA; Zinc finger DNA binding domain; binds specifically to DNA consensus sequence [AT]GATA[AG] promoter elements; a subset of family members may also bind protein; zinc-finger consensus topology is C-X(2)-C-X(17)-C-X(2)-C
  8. XM_006509638.5XP_006509701.1  transcriptional repressor p66 alpha isoform X9

    Conserved Domains (2) summary
    pfam16563
    Location:133169
    P66_CC; Coiled-coil and interaction region of P66A and P66B with MBD2
    cl29608
    Location:420453
    ZnF_GATA; Zinc finger DNA binding domain; binds specifically to DNA consensus sequence [AT]GATA[AG] promoter elements; a subset of family members may also bind protein; zinc-finger consensus topology is C-X(2)-C-X(17)-C-X(2)-C
  9. XM_036153943.1XP_036009836.1  transcriptional repressor p66 alpha isoform X15

    Conserved Domains (2) summary
    pfam16563
    Location:133169
    P66_CC; Coiled-coil and interaction region of P66A and P66B with MBD2
    cl29608
    Location:416449
    ZnF_GATA; Zinc finger DNA binding domain; binds specifically to DNA consensus sequence [AT]GATA[AG] promoter elements; a subset of family members may also bind protein; zinc-finger consensus topology is C-X(2)-C-X(17)-C-X(2)-C
  10. XM_017312719.3XP_017168208.1  transcriptional repressor p66 alpha isoform X7

    Conserved Domains (2) summary
    pfam16563
    Location:133169
    P66_CC; Coiled-coil and interaction region of P66A and P66B with MBD2
    cl29608
    Location:416448
    ZnF_GATA; Zinc finger DNA binding domain; binds specifically to DNA consensus sequence [AT]GATA[AG] promoter elements; a subset of family members may also bind protein; zinc-finger consensus topology is C-X(2)-C-X(17)-C-X(2)-C
  11. XM_030243475.2XP_030099335.1  transcriptional repressor p66 alpha isoform X15

    Conserved Domains (2) summary
    pfam16563
    Location:133169
    P66_CC; Coiled-coil and interaction region of P66A and P66B with MBD2
    cl29608
    Location:416449
    ZnF_GATA; Zinc finger DNA binding domain; binds specifically to DNA consensus sequence [AT]GATA[AG] promoter elements; a subset of family members may also bind protein; zinc-finger consensus topology is C-X(2)-C-X(17)-C-X(2)-C
  12. XM_036153940.1XP_036009833.1  transcriptional repressor p66 alpha isoform X9

    Conserved Domains (2) summary
    pfam16563
    Location:133169
    P66_CC; Coiled-coil and interaction region of P66A and P66B with MBD2
    cl29608
    Location:420453
    ZnF_GATA; Zinc finger DNA binding domain; binds specifically to DNA consensus sequence [AT]GATA[AG] promoter elements; a subset of family members may also bind protein; zinc-finger consensus topology is C-X(2)-C-X(17)-C-X(2)-C
  13. XM_030243474.2XP_030099334.1  transcriptional repressor p66 alpha isoform X14

    Conserved Domains (2) summary
    pfam16563
    Location:133169
    P66_CC; Coiled-coil and interaction region of P66A and P66B with MBD2
    cl29608
    Location:416448
    ZnF_GATA; Zinc finger DNA binding domain; binds specifically to DNA consensus sequence [AT]GATA[AG] promoter elements; a subset of family members may also bind protein; zinc-finger consensus topology is C-X(2)-C-X(17)-C-X(2)-C
  14. XM_036153944.1XP_036009837.1  transcriptional repressor p66 alpha isoform X16

    Conserved Domains (2) summary
    pfam16563
    Location:133169
    P66_CC; Coiled-coil and interaction region of P66A and P66B with MBD2
    cl29608
    Location:415448
    ZnF_GATA; Zinc finger DNA binding domain; binds specifically to DNA consensus sequence [AT]GATA[AG] promoter elements; a subset of family members may also bind protein; zinc-finger consensus topology is C-X(2)-C-X(17)-C-X(2)-C
  15. XM_036153938.1XP_036009831.1  transcriptional repressor p66 alpha isoform X8

    Conserved Domains (2) summary
    pfam16563
    Location:133169
    P66_CC; Coiled-coil and interaction region of P66A and P66B with MBD2
    cl29608
    Location:415448
    ZnF_GATA; Zinc finger DNA binding domain; binds specifically to DNA consensus sequence [AT]GATA[AG] promoter elements; a subset of family members may also bind protein; zinc-finger consensus topology is C-X(2)-C-X(17)-C-X(2)-C
  16. XM_030243472.2XP_030099332.1  transcriptional repressor p66 alpha isoform X13

    Conserved Domains (2) summary
    pfam16563
    Location:133169
    P66_CC; Coiled-coil and interaction region of P66A and P66B with MBD2
    cl29608
    Location:417449
    ZnF_GATA; Zinc finger DNA binding domain; binds specifically to DNA consensus sequence [AT]GATA[AG] promoter elements; a subset of family members may also bind protein; zinc-finger consensus topology is C-X(2)-C-X(17)-C-X(2)-C
  17. XM_036153942.1XP_036009835.1  transcriptional repressor p66 alpha isoform X12

    Conserved Domains (2) summary
    pfam16563
    Location:133169
    P66_CC; Coiled-coil and interaction region of P66A and P66B with MBD2
    cl29608
    Location:418451
    ZnF_GATA; Zinc finger DNA binding domain; binds specifically to DNA consensus sequence [AT]GATA[AG] promoter elements; a subset of family members may also bind protein; zinc-finger consensus topology is C-X(2)-C-X(17)-C-X(2)-C
  18. XM_030243463.2XP_030099323.1  transcriptional repressor p66 alpha isoform X4

    Conserved Domains (2) summary
    pfam16563
    Location:133169
    P66_CC; Coiled-coil and interaction region of P66A and P66B with MBD2
    cl29608
    Location:418450
    ZnF_GATA; Zinc finger DNA binding domain; binds specifically to DNA consensus sequence [AT]GATA[AG] promoter elements; a subset of family members may also bind protein; zinc-finger consensus topology is C-X(2)-C-X(17)-C-X(2)-C
  19. XM_036153941.1XP_036009834.1  transcriptional repressor p66 alpha isoform X10

    Conserved Domains (2) summary
    pfam16563
    Location:133169
    P66_CC; Coiled-coil and interaction region of P66A and P66B with MBD2
    cl29608
    Location:419452
    ZnF_GATA; Zinc finger DNA binding domain; binds specifically to DNA consensus sequence [AT]GATA[AG] promoter elements; a subset of family members may also bind protein; zinc-finger consensus topology is C-X(2)-C-X(17)-C-X(2)-C
  20. XM_036153939.1XP_036009832.1  transcriptional repressor p66 alpha isoform X9

    Conserved Domains (2) summary
    pfam16563
    Location:133169
    P66_CC; Coiled-coil and interaction region of P66A and P66B with MBD2
    cl29608
    Location:420453
    ZnF_GATA; Zinc finger DNA binding domain; binds specifically to DNA consensus sequence [AT]GATA[AG] promoter elements; a subset of family members may also bind protein; zinc-finger consensus topology is C-X(2)-C-X(17)-C-X(2)-C
  21. XM_030243473.2XP_030099333.1  transcriptional repressor p66 alpha isoform X14

    Conserved Domains (2) summary
    pfam16563
    Location:133169
    P66_CC; Coiled-coil and interaction region of P66A and P66B with MBD2
    cl29608
    Location:416448
    ZnF_GATA; Zinc finger DNA binding domain; binds specifically to DNA consensus sequence [AT]GATA[AG] promoter elements; a subset of family members may also bind protein; zinc-finger consensus topology is C-X(2)-C-X(17)-C-X(2)-C
  22. XM_017312716.3XP_017168205.1  transcriptional repressor p66 alpha isoform X1

    Conserved Domains (2) summary
    pfam16563
    Location:133169
    P66_CC; Coiled-coil and interaction region of P66A and P66B with MBD2
    cl29608
    Location:420452
    ZnF_GATA; Zinc finger DNA binding domain; binds specifically to DNA consensus sequence [AT]GATA[AG] promoter elements; a subset of family members may also bind protein; zinc-finger consensus topology is C-X(2)-C-X(17)-C-X(2)-C
  23. XM_011242295.4XP_011240597.1  transcriptional repressor p66 alpha isoform X6

    See identical proteins and their annotated locations for XP_011240597.1

    UniProtKB/Swiss-Prot
    Q8CHY6, Q8VEC9
    Related
    ENSMUSP00000148474.2, ENSMUST00000212478.2
    Conserved Domains (2) summary
    pfam16563
    Location:133169
    P66_CC; Coiled-coil and interaction region of P66A and P66B with MBD2
    cl29608
    Location:416448
    ZnF_GATA; Zinc finger DNA binding domain; binds specifically to DNA consensus sequence [AT]GATA[AG] promoter elements; a subset of family members may also bind protein; zinc-finger consensus topology is C-X(2)-C-X(17)-C-X(2)-C
  24. XM_017312718.3XP_017168207.1  transcriptional repressor p66 alpha isoform X2

    Conserved Domains (2) summary
    pfam16563
    Location:133169
    P66_CC; Coiled-coil and interaction region of P66A and P66B with MBD2
    cl29608
    Location:419452
    ZnF_GATA; Zinc finger DNA binding domain; binds specifically to DNA consensus sequence [AT]GATA[AG] promoter elements; a subset of family members may also bind protein; zinc-finger consensus topology is C-X(2)-C-X(17)-C-X(2)-C
  25. XM_017312714.3XP_017168203.1  transcriptional repressor p66 alpha isoform X1

    Conserved Domains (2) summary
    pfam16563
    Location:133169
    P66_CC; Coiled-coil and interaction region of P66A and P66B with MBD2
    cl29608
    Location:420452
    ZnF_GATA; Zinc finger DNA binding domain; binds specifically to DNA consensus sequence [AT]GATA[AG] promoter elements; a subset of family members may also bind protein; zinc-finger consensus topology is C-X(2)-C-X(17)-C-X(2)-C
  26. XM_030243466.2XP_030099326.1  transcriptional repressor p66 alpha isoform X6

    UniProtKB/Swiss-Prot
    Q8VEC9
    Conserved Domains (2) summary
    pfam16563
    Location:133169
    P66_CC; Coiled-coil and interaction region of P66A and P66B with MBD2
    cl29608
    Location:416448
    ZnF_GATA; Zinc finger DNA binding domain; binds specifically to DNA consensus sequence [AT]GATA[AG] promoter elements; a subset of family members may also bind protein; zinc-finger consensus topology is C-X(2)-C-X(17)-C-X(2)-C
  27. XM_036153937.1XP_036009830.1  transcriptional repressor p66 alpha isoform X5

    UniProtKB/TrEMBL
    E9QMN5
    Conserved Domains (2) summary
    pfam16563
    Location:133169
    P66_CC; Coiled-coil and interaction region of P66A and P66B with MBD2
    cl29608
    Location:417450
    ZnF_GATA; Zinc finger DNA binding domain; binds specifically to DNA consensus sequence [AT]GATA[AG] promoter elements; a subset of family members may also bind protein; zinc-finger consensus topology is C-X(2)-C-X(17)-C-X(2)-C
  28. XM_030243462.2XP_030099322.1  transcriptional repressor p66 alpha isoform X2

    Conserved Domains (2) summary
    pfam16563
    Location:133169
    P66_CC; Coiled-coil and interaction region of P66A and P66B with MBD2
    cl29608
    Location:419452
    ZnF_GATA; Zinc finger DNA binding domain; binds specifically to DNA consensus sequence [AT]GATA[AG] promoter elements; a subset of family members may also bind protein; zinc-finger consensus topology is C-X(2)-C-X(17)-C-X(2)-C
  29. XM_017312715.3XP_017168204.1  transcriptional repressor p66 alpha isoform X1

    Conserved Domains (2) summary
    pfam16563
    Location:133169
    P66_CC; Coiled-coil and interaction region of P66A and P66B with MBD2
    cl29608
    Location:420452
    ZnF_GATA; Zinc finger DNA binding domain; binds specifically to DNA consensus sequence [AT]GATA[AG] promoter elements; a subset of family members may also bind protein; zinc-finger consensus topology is C-X(2)-C-X(17)-C-X(2)-C
  30. XM_030243464.2XP_030099324.1  transcriptional repressor p66 alpha isoform X5

    UniProtKB/TrEMBL
    E9QMN5
    Conserved Domains (2) summary
    pfam16563
    Location:133169
    P66_CC; Coiled-coil and interaction region of P66A and P66B with MBD2
    cl29608
    Location:417450
    ZnF_GATA; Zinc finger DNA binding domain; binds specifically to DNA consensus sequence [AT]GATA[AG] promoter elements; a subset of family members may also bind protein; zinc-finger consensus topology is C-X(2)-C-X(17)-C-X(2)-C
  31. XM_036153934.1XP_036009827.1  transcriptional repressor p66 alpha isoform X2

    Conserved Domains (2) summary
    pfam16563
    Location:133169
    P66_CC; Coiled-coil and interaction region of P66A and P66B with MBD2
    cl29608
    Location:419452
    ZnF_GATA; Zinc finger DNA binding domain; binds specifically to DNA consensus sequence [AT]GATA[AG] promoter elements; a subset of family members may also bind protein; zinc-finger consensus topology is C-X(2)-C-X(17)-C-X(2)-C
  32. XM_017312717.3XP_017168206.1  transcriptional repressor p66 alpha isoform X1

    Conserved Domains (2) summary
    pfam16563
    Location:133169
    P66_CC; Coiled-coil and interaction region of P66A and P66B with MBD2
    cl29608
    Location:420452
    ZnF_GATA; Zinc finger DNA binding domain; binds specifically to DNA consensus sequence [AT]GATA[AG] promoter elements; a subset of family members may also bind protein; zinc-finger consensus topology is C-X(2)-C-X(17)-C-X(2)-C
  33. XM_036153935.1XP_036009828.1  transcriptional repressor p66 alpha isoform X5

    UniProtKB/TrEMBL
    E9QMN5
    Conserved Domains (2) summary
    pfam16563
    Location:133169
    P66_CC; Coiled-coil and interaction region of P66A and P66B with MBD2
    cl29608
    Location:417450
    ZnF_GATA; Zinc finger DNA binding domain; binds specifically to DNA consensus sequence [AT]GATA[AG] promoter elements; a subset of family members may also bind protein; zinc-finger consensus topology is C-X(2)-C-X(17)-C-X(2)-C
  34. XM_030243467.2XP_030099327.1  transcriptional repressor p66 alpha isoform X6

    UniProtKB/Swiss-Prot
    Q8VEC9
    Conserved Domains (2) summary
    pfam16563
    Location:133169
    P66_CC; Coiled-coil and interaction region of P66A and P66B with MBD2
    cl29608
    Location:416448
    ZnF_GATA; Zinc finger DNA binding domain; binds specifically to DNA consensus sequence [AT]GATA[AG] promoter elements; a subset of family members may also bind protein; zinc-finger consensus topology is C-X(2)-C-X(17)-C-X(2)-C
  35. XM_030243465.2XP_030099325.1  transcriptional repressor p66 alpha isoform X6

    UniProtKB/Swiss-Prot
    Q8VEC9
    Conserved Domains (2) summary
    pfam16563
    Location:133169
    P66_CC; Coiled-coil and interaction region of P66A and P66B with MBD2
    cl29608
    Location:416448
    ZnF_GATA; Zinc finger DNA binding domain; binds specifically to DNA consensus sequence [AT]GATA[AG] promoter elements; a subset of family members may also bind protein; zinc-finger consensus topology is C-X(2)-C-X(17)-C-X(2)-C
  36. XM_030243460.2XP_030099320.1  transcriptional repressor p66 alpha isoform X1

    Conserved Domains (2) summary
    pfam16563
    Location:133169
    P66_CC; Coiled-coil and interaction region of P66A and P66B with MBD2
    cl29608
    Location:420452
    ZnF_GATA; Zinc finger DNA binding domain; binds specifically to DNA consensus sequence [AT]GATA[AG] promoter elements; a subset of family members may also bind protein; zinc-finger consensus topology is C-X(2)-C-X(17)-C-X(2)-C

Suppressed Reference Sequence(s)

The following Reference Sequences have been suppressed. Explain

  1. NM_001113345.1: Suppressed sequence

    Description
    NM_001113345.1: This RefSeq was permanently suppressed because currently there is insufficient support for the transcript and the protein.