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Kctd15 potassium channel tetramerisation domain containing 15 [ Mus musculus (house mouse) ]

Gene ID: 233107, updated on 14-May-2024

Summary

Official Symbol
Kctd15provided by MGI
Official Full Name
potassium channel tetramerisation domain containing 15provided by MGI
Primary source
MGI:MGI:2385276
See related
Ensembl:ENSMUSG00000030499 AllianceGenome:MGI:2385276
Gene type
protein coding
RefSeq status
VALIDATED
Organism
Mus musculus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
Summary
Predicted to enable identical protein binding activity. Predicted to be involved in protein homooligomerization. Is expressed in several structures, including adrenal gland; esophagus; hemolymphoid system gland; nervous system; and respiratory system. Orthologous to human KCTD15 (potassium channel tetramerization domain containing 15). [provided by Alliance of Genome Resources, Apr 2022]
Expression
Broad expression in whole brain E14.5 (RPKM 20.1), CNS E14 (RPKM 19.4) and 24 other tissues See more
Orthologs
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Genomic context

See Kctd15 in Genome Data Viewer
Location:
7 B1- B2; 7 20.41 cM
Exon count:
11
Annotation release Status Assembly Chr Location
RS_2024_02 current GRCm39 (GCF_000001635.27) 7 NC_000073.7 (34336424..34354934, complement)
108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 7 NC_000073.6 (34636999..34655509, complement)

Chromosome 7 - NC_000073.7Genomic Context describing neighboring genes Neighboring gene predicted gene 12784 Neighboring gene STARR-seq mESC enhancer starr_18597 Neighboring gene STARR-seq mESC enhancer starr_18598 Neighboring gene predicted gene, 35378 Neighboring gene STARR-seq mESC enhancer starr_18604 Neighboring gene predicted gene, 57783 Neighboring gene predicted gene 12781

Genomic regions, transcripts, and products

Expression

  • Project title: Mouse ENCODE transcriptome data
  • Description: RNA profiling data sets generated by the Mouse ENCODE project.
  • BioProject: PRJNA66167
  • Publication: PMID 25409824
  • Analysis date: n/a

Variation

Alleles

Alleles of this type are documented at Mouse Genome Informatics  (MGI)
  • Endonuclease-mediated (3) 
  • Gene trapped (1) 
  • Targeted (3)  1 citation

General gene information

Markers

Clone Names

  • MGC25497

Gene Ontology Provided by MGI

Function Evidence Code Pubs
enables identical protein binding ISO
Inferred from Sequence Orthology
more info
 
enables molecular_function ND
No biological Data available
more info
 
Process Evidence Code Pubs
involved_in biological_process ND
No biological Data available
more info
 
acts_upstream_of_or_within multicellular organism development IEA
Inferred from Electronic Annotation
more info
 
involved_in protein homooligomerization IEA
Inferred from Electronic Annotation
more info
 
Component Evidence Code Pubs
located_in nucleus IDA
Inferred from Direct Assay
more info
PubMed 

General protein information

Preferred Names
BTB/POZ domain-containing protein KCTD15
Names
potassium channel tetramerization domain-containing protein 15

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001360818.2NP_001347747.1  BTB/POZ domain-containing protein KCTD15

    Status: VALIDATED

    Source sequence(s)
    BX649462
    Consensus CDS
    CCDS21141.1
    UniProtKB/Swiss-Prot
    Q8K0E1
    Related
    ENSMUSP00000032709.2, ENSMUST00000032709.3
    Conserved Domains (1) summary
    cd18388
    Location:55153
    BTB_POZ_KCTD15; BTB (Broad-Complex, Tramtrack and Bric a brac)/POZ (poxvirus and zinc finger) domain found in potassium channel tetramerization domain-containing protein 15 (KCTD15)
  2. NM_001360820.2NP_001347749.1  BTB/POZ domain-containing protein KCTD15

    Status: VALIDATED

    Source sequence(s)
    BX649462
    Consensus CDS
    CCDS21141.1
    UniProtKB/Swiss-Prot
    Q8K0E1
    Related
    ENSMUSP00000103704.2, ENSMUST00000108069.8
    Conserved Domains (1) summary
    cd18388
    Location:55153
    BTB_POZ_KCTD15; BTB (Broad-Complex, Tramtrack and Bric a brac)/POZ (poxvirus and zinc finger) domain found in potassium channel tetramerization domain-containing protein 15 (KCTD15)
  3. NM_001420858.1NP_001407787.1  BTB/POZ domain-containing protein KCTD15

    Status: VALIDATED

    Source sequence(s)
    BX649462
    UniProtKB/Swiss-Prot
    Q8K0E1
  4. NM_001420859.1NP_001407788.1  BTB/POZ domain-containing protein KCTD15

    Status: VALIDATED

    Source sequence(s)
    BX649462
    UniProtKB/Swiss-Prot
    Q8K0E1
  5. NM_001420860.1NP_001407789.1  BTB/POZ domain-containing protein KCTD15

    Status: VALIDATED

    Source sequence(s)
    BX649462
    UniProtKB/Swiss-Prot
    Q8K0E1
  6. NM_146188.2NP_666300.1  BTB/POZ domain-containing protein KCTD15

    See identical proteins and their annotated locations for NP_666300.1

    Status: VALIDATED

    Source sequence(s)
    AW124009, BC031749, BX649462
    Consensus CDS
    CCDS21141.1
    UniProtKB/Swiss-Prot
    Q8K0E1
    Related
    ENSMUSP00000103705.3, ENSMUST00000108070.9
    Conserved Domains (1) summary
    cd18388
    Location:55153
    BTB_POZ_KCTD15; BTB (Broad-Complex, Tramtrack and Bric a brac)/POZ (poxvirus and zinc finger) domain found in potassium channel tetramerization domain-containing protein 15 (KCTD15)

RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCm39 C57BL/6J

Genomic

  1. NC_000073.7 Reference GRCm39 C57BL/6J

    Range
    34336424..34354934 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_006539905.3XP_006539968.1  BTB/POZ domain-containing protein KCTD15 isoform X1

    See identical proteins and their annotated locations for XP_006539968.1

    UniProtKB/Swiss-Prot
    Q8K0E1
    Conserved Domains (1) summary
    cd18388
    Location:55153
    BTB_POZ_KCTD15; BTB (Broad-Complex, Tramtrack and Bric a brac)/POZ (poxvirus and zinc finger) domain found in potassium channel tetramerization domain-containing protein 15 (KCTD15)
  2. XM_006539904.5XP_006539967.1  BTB/POZ domain-containing protein KCTD15 isoform X1

    See identical proteins and their annotated locations for XP_006539967.1

    UniProtKB/Swiss-Prot
    Q8K0E1
    Conserved Domains (1) summary
    cd18388
    Location:55153
    BTB_POZ_KCTD15; BTB (Broad-Complex, Tramtrack and Bric a brac)/POZ (poxvirus and zinc finger) domain found in potassium channel tetramerization domain-containing protein 15 (KCTD15)
  3. XM_006539901.5XP_006539964.1  BTB/POZ domain-containing protein KCTD15 isoform X1

    See identical proteins and their annotated locations for XP_006539964.1

    UniProtKB/Swiss-Prot
    Q8K0E1
    Conserved Domains (1) summary
    cd18388
    Location:55153
    BTB_POZ_KCTD15; BTB (Broad-Complex, Tramtrack and Bric a brac)/POZ (poxvirus and zinc finger) domain found in potassium channel tetramerization domain-containing protein 15 (KCTD15)