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RSPH10B radial spoke head 10 homolog B [ Homo sapiens (human) ]

Gene ID: 222967, updated on 27-Sep-2020

Summary

Official Symbol
RSPH10Bprovided by HGNC
Official Full Name
radial spoke head 10 homolog Bprovided by HGNC
Primary source
HGNC:HGNC:27362
See related
Ensembl:ENSG00000155026
Gene type
protein coding
RefSeq status
VALIDATED
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Expression
Restricted expression toward testis (RPKM 16.5) See more
Orthologs

Genomic context

See RSPH10B in Genome Data Viewer
Location:
7p22.1
Exon count:
23
Annotation release Status Assembly Chr Location
109.20200815 current GRCh38.p13 (GCF_000001405.39) 7 NC_000007.14 (5926136..5970850, complement)
105 previous assembly GRCh37.p13 (GCF_000001405.25) 7 NC_000007.13 (5965777..6010322, complement)

Chromosome 7 - NC_000007.14Genomic Context describing neighboring genes Neighboring gene CCZ1 homolog, vacuolar protein trafficking and biogenesis associated Neighboring gene nonconserved acetylation island sequence 61 enhancer Neighboring gene uncharacterized LOC107986694 Neighboring gene PMS1 homolog 2, mismatch repair system component Neighboring gene aminoacyl tRNA synthetase complex interacting multifunctional protein 2 Neighboring gene small nucleolar RNA, H/ACA box 80D

Genomic regions, transcripts, and products

Expression

  • Project title: HPA RNA-seq normal tissues
  • Description: RNA-seq was performed of tissue samples from 95 human individuals representing 27 different tissues in order to determine tissue-specificity of all protein-coding genes
  • BioProject: PRJEB4337
  • Publication: PMID 24309898
  • Analysis date: Wed Apr 4 07:08:55 2018

HIV-1 interactions

Replication interactions

Interaction Pubs
Knockdown of radial spoke head 10 homolog B (RSPH10B) by siRNA inhibits HIV-1 replication in HeLa P4/R5 cells PubMed

Go to the HIV-1, Human Interaction Database

Interactions

Products Interactant Other Gene Complex Source Pubs Description

General gene information

Markers

Homology

Clone Names

  • MGC50833

General protein information

Preferred Names
radial spoke head 10 homolog B
Names
radial spoke head 10 homolog B2

NCBI Reference Sequences (RefSeq)

RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_173565.4NP_775836.4  radial spoke head 10 homolog B

    Status: VALIDATED

    Source sequence(s)
    AC004983, AC005995
    Consensus CDS
    CCDS34598.1
    Related
    ENSP00000384097.1, ENST00000404406.5
    Conserved Domains (2) summary
    PLN03185
    Location:128335
    PLN03185; phosphatidylinositol phosphate kinase; Provisional
    COG4642
    Location:86162
    COG4642; Uncharacterized conserved protein [Function unknown]

RefSeqs of Annotated Genomes: Homo sapiens Updated Annotation Release 109.20200815

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p13 Primary Assembly

Genomic

  1. NC_000007.14 Reference GRCh38.p13 Primary Assembly

    Range
    5926136..5970850 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_011515204.2XP_011513506.1  radial spoke head 10 homolog B isoform X1

    See identical proteins and their annotated locations for XP_011513506.1

    Conserved Domains (1) summary
    cl27415
    Location:128318
    COG4642; Uncharacterized conserved protein [Function unknown]
  2. XM_011515209.3XP_011513511.1  radial spoke head 10 homolog B isoform X4

  3. XM_005249659.4XP_005249716.1  radial spoke head 10 homolog B isoform X2

    See identical proteins and their annotated locations for XP_005249716.1

    UniProtKB/Swiss-Prot
    P0C881
    Conserved Domains (2) summary
    PLN03185
    Location:128335
    PLN03185; phosphatidylinositol phosphate kinase; Provisional
    COG4642
    Location:86162
    COG4642; Uncharacterized conserved protein [Function unknown]
  4. XM_011515208.3XP_011513510.1  radial spoke head 10 homolog B isoform X3

  5. XM_024446691.1XP_024302459.1  radial spoke head 10 homolog B isoform X1

    Conserved Domains (1) summary
    cl27415
    Location:128318
    COG4642; Uncharacterized conserved protein [Function unknown]
  6. XM_011515207.1XP_011513509.1  radial spoke head 10 homolog B isoform X1

    See identical proteins and their annotated locations for XP_011513509.1

    Conserved Domains (1) summary
    cl27415
    Location:128318
    COG4642; Uncharacterized conserved protein [Function unknown]
  7. XM_011515203.1XP_011513505.1  radial spoke head 10 homolog B isoform X1

    See identical proteins and their annotated locations for XP_011513505.1

  8. XM_011515211.1XP_011513513.1  radial spoke head 10 homolog B isoform X7

  9. XM_011515210.1XP_011513512.1  radial spoke head 10 homolog B isoform X6

  10. XM_017011870.2XP_016867359.1  radial spoke head 10 homolog B isoform X5

    Conserved Domains (2) summary
    PLN03185
    Location:128318
    PLN03185; phosphatidylinositol phosphate kinase; Provisional
    COG4642
    Location:86162
    COG4642; Uncharacterized conserved protein [Function unknown]
  11. XM_011515212.3XP_011513514.1  radial spoke head 10 homolog B isoform X8

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