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Tgm2 transglutaminase 2, C polypeptide [ Mus musculus (house mouse) ]

Gene ID: 21817, updated on 2-Nov-2024

Summary

Official Symbol
Tgm2provided by MGI
Official Full Name
transglutaminase 2, C polypeptideprovided by MGI
Primary source
MGI:MGI:98731
See related
Ensembl:ENSMUSG00000037820 AllianceGenome:MGI:98731
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Mus musculus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
Also known as
TG2; tTG; G[a]h; tTGas; TGase2
Summary
Enables protein-glutamine gamma-glutamyltransferase activity. Involved in intracellular calcium ion homeostasis; positive regulation of cell adhesion; and regulation of apoptotic cell clearance. Acts upstream of or within branching involved in salivary gland morphogenesis and salivary gland cavitation. Located in collagen-containing extracellular matrix. Is expressed in several structures, including alimentary system; bone; central nervous system; genitourinary system; and sensory organ. Used to study maturity-onset diabetes of the young. Orthologous to human TGM2 (transglutaminase 2). [provided by Alliance of Genome Resources, Nov 2024]
Expression
Broad expression in mammary gland adult (RPKM 134.3), lung adult (RPKM 130.8) and 19 other tissues See more
Orthologs
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Genomic context

See Tgm2 in Genome Data Viewer
Location:
2 H1; 2 78.72 cM
Exon count:
13
Annotation release Status Assembly Chr Location
RS_2024_02 current GRCm39 (GCF_000001635.27) 2 NC_000068.8 (157958325..157988312, complement)
108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 2 NC_000068.7 (158116405..158146392, complement)

Chromosome 2 - NC_000068.8Genomic Context describing neighboring genes Neighboring gene regulation of nuclear pre-mRNA domain containing 1B Neighboring gene RIKEN cDNA 2010009K17 gene Neighboring gene STARR-seq mESC enhancer starr_06227 Neighboring gene STARR-seq mESC enhancer starr_06228 Neighboring gene predicted gene, 34458 Neighboring gene STARR-seq mESC enhancer starr_06229 Neighboring gene RIKEN cDNA D630003M21 gene Neighboring gene RIKEN cDNA 1700060C20 gene Neighboring gene predicted gene, 34514

Genomic regions, transcripts, and products

Expression

  • Project title: Mouse ENCODE transcriptome data Mouse ENCODE transcriptome data
  • Description: RNA profiling data sets generated by the Mouse ENCODE project.
  • BioProject: PRJNA66167
  • Publication: PMID 25409824
  • Analysis date: n/a

Bibliography

GeneRIFs: Gene References Into Functions

What's a GeneRIF?

Variation

Alleles

Alleles of this type are documented at Mouse Genome Informatics  (MGI)

Interactions

Products Interactant Other Gene Complex Source Pubs Description

General gene information

Markers

Gene Ontology Provided by MGI

Function Evidence Code Pubs
enables GTP binding ISO
Inferred from Sequence Orthology
more info
 
enables GTP binding ISS
Inferred from Sequence or Structural Similarity
more info
 
enables GTP binding NAS
Non-traceable Author Statement
more info
PubMed 
enables calcium ion binding ISO
Inferred from Sequence Orthology
more info
 
enables calcium ion binding ISS
Inferred from Sequence or Structural Similarity
more info
 
enables calcium ion binding NAS
Non-traceable Author Statement
more info
PubMed 
enables histone dopaminyltransferase activity ISO
Inferred from Sequence Orthology
more info
 
enables histone dopaminyltransferase activity ISS
Inferred from Sequence or Structural Similarity
more info
 
enables histone serotonyltransferase activity ISO
Inferred from Sequence Orthology
more info
 
enables histone serotonyltransferase activity ISS
Inferred from Sequence or Structural Similarity
more info
 
enables identical protein binding ISO
Inferred from Sequence Orthology
more info
 
enables peptidase activity IEA
Inferred from Electronic Annotation
more info
 
enables peptide histaminyltransferase activity ISO
Inferred from Sequence Orthology
more info
 
enables peptide histaminyltransferase activity ISS
Inferred from Sequence or Structural Similarity
more info
 
enables peptide noradrenalinyltransferase activity IEA
Inferred from Electronic Annotation
more info
 
enables phospholipase binding ISO
Inferred from Sequence Orthology
more info
 
enables protein domain specific binding ISO
Inferred from Sequence Orthology
more info
 
enables protein-glutamine gamma-glutamyltransferase activity IBA
Inferred from Biological aspect of Ancestor
more info
 
enables protein-glutamine gamma-glutamyltransferase activity IMP
Inferred from Mutant Phenotype
more info
PubMed 
enables protein-glutamine gamma-glutamyltransferase activity ISO
Inferred from Sequence Orthology
more info
 
enables protein-glutamine glutaminase activity ISO
Inferred from Sequence Orthology
more info
 
enables protein-glutamine glutaminase activity ISS
Inferred from Sequence or Structural Similarity
more info
 
enables transaminase activity ISO
Inferred from Sequence Orthology
more info
PubMed 
Process Evidence Code Pubs
involved_in G protein-coupled receptor signaling pathway TAS
Traceable Author Statement
more info
PubMed 
involved_in apoptotic cell clearance IEA
Inferred from Electronic Annotation
more info
 
involved_in apoptotic cell clearance ISO
Inferred from Sequence Orthology
more info
 
involved_in blood vessel remodeling ISO
Inferred from Sequence Orthology
more info
 
involved_in bone development ISS
Inferred from Sequence or Structural Similarity
more info
 
acts_upstream_of_or_within branching involved in salivary gland morphogenesis IMP
Inferred from Mutant Phenotype
more info
PubMed 
involved_in cellular response to cocaine IEA
Inferred from Electronic Annotation
more info
 
involved_in cellular response to cocaine ISO
Inferred from Sequence Orthology
more info
 
involved_in cellular response to dopamine ISO
Inferred from Sequence Orthology
more info
 
involved_in cellular response to dopamine ISS
Inferred from Sequence or Structural Similarity
more info
 
involved_in cellular response to serotonin ISO
Inferred from Sequence Orthology
more info
 
involved_in cellular response to serotonin ISS
Inferred from Sequence or Structural Similarity
more info
 
involved_in chromatin remodeling IEA
Inferred from Electronic Annotation
more info
 
involved_in dopamine secretion IEA
Inferred from Electronic Annotation
more info
 
acts_upstream_of_positive_effect dopamine secretion ISO
Inferred from Sequence Orthology
more info
 
involved_in gene expression IEA
Inferred from Electronic Annotation
more info
 
acts_upstream_of_positive_effect gene expression ISO
Inferred from Sequence Orthology
more info
 
involved_in negative regulation of endoplasmic reticulum calcium ion concentration IMP
Inferred from Mutant Phenotype
more info
PubMed 
involved_in negative regulation of endoplasmic reticulum calcium ion concentration ISO
Inferred from Sequence Orthology
more info
 
involved_in peptide cross-linking ISO
Inferred from Sequence Orthology
more info
 
involved_in peptide cross-linking ISS
Inferred from Sequence or Structural Similarity
more info
 
involved_in peptide cross-linking TAS
Traceable Author Statement
more info
PubMed 
involved_in phospholipase C-activating G protein-coupled receptor signaling pathway IBA
Inferred from Biological aspect of Ancestor
more info
 
acts_upstream_of_or_within phospholipase C-activating G protein-coupled receptor signaling pathway ISA
Inferred from Sequence Alignment
more info
PubMed 
involved_in phospholipase C-activating G protein-coupled receptor signaling pathway ISO
Inferred from Sequence Orthology
more info
 
involved_in phospholipase C-activating G protein-coupled receptor signaling pathway ISS
Inferred from Sequence or Structural Similarity
more info
 
involved_in positive regulation of GTPase activity ISS
Inferred from Sequence or Structural Similarity
more info
 
involved_in positive regulation of apoptotic process IBA
Inferred from Biological aspect of Ancestor
more info
 
involved_in positive regulation of apoptotic process ISO
Inferred from Sequence Orthology
more info
 
involved_in positive regulation of apoptotic process ISS
Inferred from Sequence or Structural Similarity
more info
 
involved_in positive regulation of canonical NF-kappaB signal transduction ISO
Inferred from Sequence Orthology
more info
 
involved_in positive regulation of cell adhesion IMP
Inferred from Mutant Phenotype
more info
PubMed 
involved_in positive regulation of mitochondrial calcium ion concentration IMP
Inferred from Mutant Phenotype
more info
PubMed 
involved_in positive regulation of mitochondrial calcium ion concentration ISO
Inferred from Sequence Orthology
more info
 
involved_in positive regulation of neurogenesis IEA
Inferred from Electronic Annotation
more info
 
involved_in positive regulation of neurogenesis ISO
Inferred from Sequence Orthology
more info
 
involved_in positive regulation of small GTPase mediated signal transduction ISS
Inferred from Sequence or Structural Similarity
more info
 
involved_in positive regulation of smooth muscle cell proliferation ISO
Inferred from Sequence Orthology
more info
 
involved_in positive regulation of sprouting angiogenesis IEA
Inferred from Electronic Annotation
more info
 
involved_in positive regulation of sprouting angiogenesis ISO
Inferred from Sequence Orthology
more info
 
involved_in protein deamination ISO
Inferred from Sequence Orthology
more info
 
involved_in protein deamination ISS
Inferred from Sequence or Structural Similarity
more info
 
involved_in protein homooligomerization ISO
Inferred from Sequence Orthology
more info
 
involved_in protein homooligomerization ISS
Inferred from Sequence or Structural Similarity
more info
 
involved_in proteolysis IEA
Inferred from Electronic Annotation
more info
 
involved_in regulation of apoptotic cell clearance IMP
Inferred from Mutant Phenotype
more info
PubMed 
involved_in regulation of apoptotic cell clearance ISO
Inferred from Sequence Orthology
more info
 
involved_in regulation of apoptotic process ISO
Inferred from Sequence Orthology
more info
 
involved_in regulation of apoptotic process ISS
Inferred from Sequence or Structural Similarity
more info
 
acts_upstream_of_or_within salivary gland cavitation IMP
Inferred from Mutant Phenotype
more info
PubMed 
Component Evidence Code Pubs
located_in chromatin ISO
Inferred from Sequence Orthology
more info
 
located_in chromatin ISS
Inferred from Sequence or Structural Similarity
more info
 
located_in collagen-containing extracellular matrix HDA PubMed 
located_in cytoplasm ISA
Inferred from Sequence Alignment
more info
PubMed 
located_in cytosol ISO
Inferred from Sequence Orthology
more info
 
located_in cytosol ISS
Inferred from Sequence or Structural Similarity
more info
 
located_in cytosol TAS
Traceable Author Statement
more info
PubMed 
located_in endoplasmic reticulum IEA
Inferred from Electronic Annotation
more info
 
located_in extracellular matrix ISO
Inferred from Sequence Orthology
more info
 
located_in extracellular matrix TAS
Traceable Author Statement
more info
PubMed 
located_in extracellular region IEA
Inferred from Electronic Annotation
more info
 
located_in membrane TAS
Traceable Author Statement
more info
PubMed 
is_active_in mitochondrion IBA
Inferred from Biological aspect of Ancestor
more info
 
located_in mitochondrion IEA
Inferred from Electronic Annotation
more info
 
located_in mitochondrion ISO
Inferred from Sequence Orthology
more info
 
part_of nucleosome IEA
Inferred from Electronic Annotation
more info
 
part_of nucleosome ISO
Inferred from Sequence Orthology
more info
 
located_in nucleus ISO
Inferred from Sequence Orthology
more info
 
located_in nucleus ISS
Inferred from Sequence or Structural Similarity
more info
 
located_in perinuclear region of cytoplasm ISO
Inferred from Sequence Orthology
more info
 
located_in plasma membrane IEA
Inferred from Electronic Annotation
more info
 
located_in plasma membrane ISO
Inferred from Sequence Orthology
more info
 

General protein information

Preferred Names
protein-glutamine gamma-glutamyltransferase 2
Names
C polypeptide
TG(C)
TGC
TGase C
TGase II
TGase-2
isopeptidase TGM2
protein-glutamine deamidase TGM2
protein-glutamine dopaminyltransferase TGM2
protein-glutamine histaminyltransferase TGM2
protein-glutamine noradrenalinyltransferase TGM2
protein-glutamine serotonyltransferase TGM2
protein-glutamine-gamma-glutamyltransferase
tissue transglutaminase
transglutaminase C
transglutaminase II
transglutaminase-2
NP_033399.1

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_009373.3NP_033399.1  protein-glutamine gamma-glutamyltransferase 2

    See identical proteins and their annotated locations for NP_033399.1

    Status: PROVISIONAL

    Source sequence(s)
    AL669824
    Consensus CDS
    CCDS16985.1
    UniProtKB/Swiss-Prot
    O88901, P21981, Q3TLV2, Q8C217, Q91VG9, Q9R1F7
    Related
    ENSMUSP00000099411.4, ENSMUST00000103122.10
    Conserved Domains (4) summary
    smart00460
    Location:269361
    TGc; Transglutaminase/protease-like homologues
    COG1305
    Location:273369
    YebA; Transglutaminase-like enzyme, putative cysteine protease [Posttranslational modification, protein turnover, chaperones]
    pfam00868
    Location:7120
    Transglut_N; Transglutaminase family
    pfam00927
    Location:473572
    Transglut_C; Transglutaminase family, C-terminal ig like domain

RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCm39 C57BL/6J

Genomic

  1. NC_000068.8 Reference GRCm39 C57BL/6J

    Range
    157958325..157988312 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)