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Tex264 testis expressed gene 264 [ Mus musculus (house mouse) ]

Gene ID: 21767, updated on 23-Jun-2021

Summary

Official Symbol
Tex264provided by MGI
Official Full Name
testis expressed gene 264provided by MGI
Primary source
MGI:MGI:1096570
See related
Ensembl:ENSMUSG00000040813
Gene type
protein coding
RefSeq status
VALIDATED
Organism
Mus musculus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
Also known as
TEG-264
Expression
Ubiquitous expression in adrenal adult (RPKM 59.7), kidney adult (RPKM 57.5) and 28 other tissues See more
Orthologs
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Genomic context

See Tex264 in Genome Data Viewer
Location:
9; 9 F1
Exon count:
7
Annotation release Status Assembly Chr Location
109 current GRCm39 (GCF_000001635.27) 9 NC_000075.7 (106535945..106563151, complement)
108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 9 NC_000075.6 (106658746..106685952, complement)
Build 37.2 previous assembly MGSCv37 (GCF_000001635.18) 9 NC_000075.5 (106561077..106588279, complement)

Chromosome 9 - NC_000075.7Genomic Context describing neighboring genes Neighboring gene predicted gene 28111 Neighboring gene glutamate receptor, metabotropic 2 Neighboring gene RAD54 like 2 (S. cerevisiae) Neighboring gene DDB1 and CUL4 associated factor 1 Neighboring gene RNA binding motif protein 15B

Genomic regions, transcripts, and products

Expression

  • Project title: Mouse ENCODE transcriptome data
  • Description: RNA profiling data sets generated by the Mouse ENCODE project.
  • BioProject: PRJNA66167
  • Publication: PMID 25409824
  • Analysis date: n/a

Variation

Alleles

Alleles of this type are documented at Mouse Genome Informatics  (MGI)
  • Gene trapped (1) 

General gene information

Homology

Gene Ontology Provided by MGI

Function Evidence Code Pubs
enables signaling receptor activity ISO
Inferred from Sequence Orthology
more info
PubMed 
Process Evidence Code Pubs
acts_upstream_of_or_within DNA repair IEA
Inferred from Electronic Annotation
more info
 
acts_upstream_of_or_within autophagy IEA
Inferred from Electronic Annotation
more info
 
acts_upstream_of_or_within cellular response to DNA damage stimulus IEA
Inferred from Electronic Annotation
more info
 
involved_in protein-DNA covalent cross-linking repair IBA
Inferred from Biological aspect of Ancestor
more info
PubMed 
involved_in protein-DNA covalent cross-linking repair ISO
Inferred from Sequence Orthology
more info
 
involved_in reticulophagy IBA
Inferred from Biological aspect of Ancestor
more info
PubMed 
acts_upstream_of_or_within reticulophagy ISO
Inferred from Sequence Orthology
more info
PubMed 
involved_in reticulophagy ISO
Inferred from Sequence Orthology
more info
 
Component Evidence Code Pubs
is_active_in autophagosome membrane IBA
Inferred from Biological aspect of Ancestor
more info
PubMed 
located_in autophagosome membrane IDA
Inferred from Direct Assay
more info
PubMed 
located_in autophagosome membrane ISO
Inferred from Sequence Orthology
more info
 
located_in chromosome IEA
Inferred from Electronic Annotation
more info
 
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
 
located_in cytoplasmic vesicle IEA
Inferred from Electronic Annotation
more info
 
located_in cytosol ISO
Inferred from Sequence Orthology
more info
 
located_in endoplasmic reticulum IDA
Inferred from Direct Assay
more info
PubMed 
is_active_in endoplasmic reticulum membrane IBA
Inferred from Biological aspect of Ancestor
more info
PubMed 
located_in endoplasmic reticulum membrane ISO
Inferred from Sequence Orthology
more info
 
located_in integral component of membrane IEA
Inferred from Electronic Annotation
more info
 
located_in membrane IEA
Inferred from Electronic Annotation
more info
 
is_active_in nucleus IBA
Inferred from Biological aspect of Ancestor
more info
PubMed 
located_in nucleus ISO
Inferred from Sequence Orthology
more info
 
is_active_in replication fork IBA
Inferred from Biological aspect of Ancestor
more info
PubMed 
located_in replication fork ISO
Inferred from Sequence Orthology
more info
 

General protein information

Preferred Names
testis-expressed protein 264 homolog
Names
testis-expressed protein 264

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001081654.2NP_001075123.1  testis-expressed protein 264 homolog

    See identical proteins and their annotated locations for NP_001075123.1

    Status: VALIDATED

    Description
    Transcript Variant: This variant (2) differs in the 5' UTR, compared to variant 1. Variants 1, 2, and 3 encode the same protein.
    Source sequence(s)
    AK003113, AK009326, BU700575, BY096844
    Consensus CDS
    CCDS23483.1
    UniProtKB/TrEMBL
    E9Q137, Q9D7D9
    Related
    ENSMUSP00000044654.5, ENSMUST00000046735.11
    Conserved Domains (1) summary
    cl01368
    Location:45112
    GyrI-like; GyrI-like small molecule binding domain
  2. NM_001286498.1NP_001273427.1  testis-expressed protein 264 homolog

    See identical proteins and their annotated locations for NP_001273427.1

    Status: VALIDATED

    Description
    Transcript Variant: This variant (3) differs in the 5' UTR, compared to variant 1. Variants 1, 2, and 3 encode the same protein.
    Source sequence(s)
    AK009326, AK159046, BU700575, BY096844, BY331401
    Consensus CDS
    CCDS23483.1
    UniProtKB/TrEMBL
    E9Q137, Q3TXY2, Q9D7D9
    Related
    ENSMUSP00000133194.3, ENSMUST00000169068.8
    Conserved Domains (1) summary
    cl01368
    Location:45112
    GyrI-like; GyrI-like small molecule binding domain
  3. NM_011573.3NP_035703.2  testis-expressed protein 264 homolog

    See identical proteins and their annotated locations for NP_035703.2

    Status: VALIDATED

    Description
    Transcript Variant: This variant (1) represents the longest transcript. Variants 1, 2, and 3 encode the same protein.
    Source sequence(s)
    AC125188, AK009326, AK159046, BU700575
    Consensus CDS
    CCDS23483.1
    UniProtKB/TrEMBL
    E9Q137, Q3TXY2, Q9D7D9
    Related
    ENSMUSP00000132247.2, ENSMUST00000163441.8
    Conserved Domains (1) summary
    cl01368
    Location:45112
    GyrI-like; GyrI-like small molecule binding domain

RNA

  1. NR_104459.1 RNA Sequence

    Status: VALIDATED

    Description
    Transcript Variant: This variant (4) lacks an alternate internal exon, compared to variant 1. This variant is represented as non-coding because the predicted protein does not meet RefSeq quality criteria.
    Source sequence(s)
    AK009326, BU700575, BY096844, DV656490

RefSeqs of Annotated Genomes: Mus musculus Annotation Release 109 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCm39 C57BL/6J

Genomic

  1. NC_000075.7 Reference GRCm39 C57BL/6J

    Range
    106535945..106563151 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
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