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Uqcc4 ubiquinol-cytochrome c reductase complex assembly factor 4 [ Mus musculus (house mouse) ]

Gene ID: 214489, updated on 9-Mar-2023

Summary

Official Symbol
Uqcc4provided by MGI
Official Full Name
ubiquinol-cytochrome c reductase complex assembly factor 4provided by MGI
Primary source
MGI:MGI:2670966
See related
Ensembl:ENSMUSG00000067722 AllianceGenome:MGI:2670966
Gene type
protein coding
RefSeq status
VALIDATED
Organism
Mus musculus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
Also known as
Ccsmst1
Summary
Predicted to be located in membrane. Predicted to be integral component of membrane. Orthologous to human C16orf91 (chromosome 16 open reading frame 91). [provided by Alliance of Genome Resources, Apr 2022]
Expression
Ubiquitous expression in CNS E11.5 (RPKM 12.3), adrenal adult (RPKM 10.5) and 28 other tissues See more
Orthologs
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Genomic context

See Uqcc4 in Genome Data Viewer
Location:
17; 17 A3.3
Exon count:
2
Annotation release Status Assembly Chr Location
109 current GRCm39 (GCF_000001635.27) 17 NC_000083.7 (25403535..25406636)
108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 17 NC_000083.6 (25184561..25187662)

Chromosome 17 - NC_000083.7Genomic Context describing neighboring genes Neighboring gene coiled-coil domain containing 154 Neighboring gene intestine-critical region regulatory element Neighboring gene proline and glutamate rich with coiled coil 1 Neighboring gene predicted gene, 52286 Neighboring gene unkempt family like zinc finger Neighboring gene N-acetylglucosamine-1-phosphotransferase, gamma subunit Neighboring gene TSR3 20S rRNA accumulation

Genomic regions, transcripts, and products

Expression

  • Project title: Mouse ENCODE transcriptome data
  • Description: RNA profiling data sets generated by the Mouse ENCODE project.
  • BioProject: PRJNA66167
  • Publication: PMID 25409824
  • Analysis date: n/a

General gene information

Markers

Homology

Clone Names

  • MGC7403

Gene Ontology Provided by MGI

Function Evidence Code Pubs
enables molecular_function ND
No biological Data available
more info
 
Process Evidence Code Pubs
involved_in biological_process ND
No biological Data available
more info
 
involved_in mitochondrial respiratory chain complex III assembly IMP
Inferred from Mutant Phenotype
more info
PubMed 
Component Evidence Code Pubs
is_active_in cellular_component ND
No biological Data available
more info
 
located_in membrane IEA
Inferred from Electronic Annotation
more info
 
located_in mitochondrial inner membrane IDA
Inferred from Direct Assay
more info
PubMed 

General protein information

Preferred Names
ubiquinol-cytochrome-c reductase complex assembly factor 4
Names
protein CCSMST1

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_183150.2NP_898973.2  ubiquinol-cytochrome-c reductase complex assembly factor 4 precursor

    See identical proteins and their annotated locations for NP_898973.2

    Status: VALIDATED

    Source sequence(s)
    AC130711, BC094389, BY262222
    Consensus CDS
    CCDS57057.1
    UniProtKB/Swiss-Prot
    Q6RUT7
    Related
    ENSMUSP00000137122.2, ENSMUST00000088307.5
    Conserved Domains (2) summary
    pfam04697
    Location:761
    Pinin_SDK_N; pinin/SDK conserved region
    pfam15013
    Location:49111
    CCSMST1; CCSMST1 family

RefSeqs of Annotated Genomes: Mus musculus Annotation Release 109 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCm39 C57BL/6J

Genomic

  1. NC_000083.7 Reference GRCm39 C57BL/6J

    Range
    25403535..25406636
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)