9530068E07Rik RIKEN cDNA 9530068E07 gene [Mus musculus (house mouse)] - Gene

Summary

Official Symbol: 9530068E07Rikprovided by MGI
Official Full Name: RIKEN cDNA 9530068E07 geneprovided by MGI
Primary source: MGI:MGI:2654705
See related: Ensembl:ENSMUSG00000036275 AllianceGenome:MGI:2654705
Gene type: protein coding
RefSeq status: PROVISIONAL
Organism: Mus musculus
Lineage: Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
Also known as: Kct2
Summary: Predicted to be located in membrane. Predicted to be integral component of membrane. Orthologous to human C5orf15 (chromosome 5 open reading frame 15). [provided by Alliance of Genome Resources, Apr 2022]
Expression: Ubiquitous expression in ovary adult (RPKM 94.8), kidney adult (RPKM 89.0) and 28 other tissues See more
Orthologs: human all
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Genomic context

Location:: 11; 11 B1.3

Exon count:: 3

Annotation release	Status	Assembly	Chr	Location
109	current	GRCm39 (GCF_000001635.27)	11	NC_000077.7 (52287255..52299550)
108.20200622	previous assembly	GRCm38.p6 (GCF_000001635.26)	11	NC_000077.6 (52396428..52408723)

Chromosome 11 - NC_000077.7 Genomic Context describing neighboring genes

Genomic regions, transcripts, and products

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Genomic Sequence:

Go to nucleotide: Graphics FASTA GenBank

Expression

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See details

Project title: Mouse ENCODE transcriptome data
Description: RNA profiling data sets generated by the Mouse ENCODE project.
BioProject: PRJNA66167
Publication: PMID 25409824
Analysis date: n/a

Bibliography

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GeneRIFs: Gene References Into Functions

What's a GeneRIF?

Submit: New GeneRIF Correction

Variation

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Alleles

Alleles of this type are documented at Mouse Genome Informatics (MGI)

Endonuclease-mediated (1)

Interactions

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Products	Interactant	Other Gene	Complex	Source	Pubs	Description

General gene information

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Homology

Homologs of the 9530068E07Rik gene: The 9530068E07Rik gene is conserved in human, chimpanzee, Rhesus monkey, dog, cow, rat, and chicken.
Orthologs from Annotation Pipeline: 466 organisms have orthologs with human gene 9530068E07Rik
Orthologs

Gene Ontology Provided by MGI

Function	Evidence Code	Pubs
enables molecular_function	ND No biological Data available more info

Process	Evidence Code	Pubs
involved_in biological_process	ND No biological Data available more info

Component	Evidence Code	Pubs
is_active_in cellular_component	ND No biological Data available more info
located_in membrane	IEA Inferred from Electronic Annotation more info

General protein information

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Preferred Names: keratinocyte-associated transmembrane protein 2

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

NM_153117.2 → NP_694757.1 keratinocyte-associated transmembrane protein 2 precursor

See identical proteins and their annotated locations for NP_694757.1

Status: PROVISIONAL

Source sequence(s)

AK079269

Consensus CDS

CCDS24672.1

UniProtKB/Swiss-Prot

Q8K201, Q9CVN1

UniProtKB/TrEMBL

Q3U339

Related

ENSMUSP00000048441.5, ENSMUST00000036952.5

Conserved Domains (1) summary

pfam07462
Location:50 → 168

MSP1_C; Merozoite surface protein 1 (MSP1) C-terminus