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Rad51ap2 RAD51 associated protein 2 [ Mus musculus (house mouse) ]

Gene ID: 209550, updated on 12-Mar-2024

Summary

Official Symbol
Rad51ap2provided by MGI
Official Full Name
RAD51 associated protein 2provided by MGI
Primary source
MGI:MGI:3644580
See related
Ensembl:ENSMUSG00000086022 AllianceGenome:MGI:3644580
Gene type
protein coding
RefSeq status
VALIDATED
Organism
Mus musculus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
Also known as
EG209550
Summary
Predicted to be part of protein-containing complex. Orthologous to human RAD51AP2 (RAD51 associated protein 2). [provided by Alliance of Genome Resources, Apr 2022]
Expression
Low expression observed in reference dataset See more
Orthologs
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Genomic context

Location:
12 A1.1; 12 5.58 cM
Exon count:
4
Annotation release Status Assembly Chr Location
RS_2024_02 current GRCm39 (GCF_000001635.27) 12 NC_000078.7 (11506024..11513154)
108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 12 NC_000078.6 (11456023..11463153)

Chromosome 12 - NC_000078.7Genomic Context describing neighboring genes Neighboring gene visinin-like 1 Neighboring gene STARR-seq mESC enhancer starr_31541 Neighboring gene RIKEN cDNA 4930511A02 gene Neighboring gene STARR-seq mESC enhancer starr_31542 Neighboring gene STARR-seq mESC enhancer starr_31543 Neighboring gene heat shock protein 1 (chaperonin) pseudogene 9 Neighboring gene predicted gene 6867

Genomic regions, transcripts, and products

Expression

  • Project title: Mouse ENCODE transcriptome data
  • Description: RNA profiling data sets generated by the Mouse ENCODE project.
  • BioProject: PRJNA66167
  • Publication: PMID 25409824
  • Analysis date: n/a

Variation

Alleles

Alleles of this type are documented at Mouse Genome Informatics  (MGI)

General gene information

Markers

Gene Ontology Provided by MGI

Function Evidence Code Pubs
enables molecular_function ND
No biological Data available
more info
 
Process Evidence Code Pubs
involved_in biological_process ND
No biological Data available
more info
 
Component Evidence Code Pubs
part_of protein-containing complex IBA
Inferred from Biological aspect of Ancestor
more info
 
part_of protein-containing complex ISO
Inferred from Sequence Orthology
more info
 

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001111118.2NP_001104588.1  RAD51-associated protein 2

    See identical proteins and their annotated locations for NP_001104588.1

    Status: VALIDATED

    Source sequence(s)
    AC139207, CT009765
    Consensus CDS
    CCDS49029.1
    UniProtKB/TrEMBL
    G3UW63
    Related
    ENSMUSP00000128854.2, ENSMUST00000124065.2
    Conserved Domains (1) summary
    pfam15696
    Location:937975
    RAD51_interact; RAD51 interacting motif

RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCm39 C57BL/6J

Genomic

  1. NC_000078.7 Reference GRCm39 C57BL/6J

    Range
    11506024..11513154
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_030246640.1XP_030102500.1  RAD51-associated protein 2 isoform X2

    Conserved Domains (2) summary
    pfam16304
    Location:872
    DUF4946; Domain of unknown function (DUF4946)
    pfam15696
    Location:129167
    RAD51_interact; RAD51 interacting motif
  2. XM_030246639.2XP_030102499.1  RAD51-associated protein 2 isoform X1

    Conserved Domains (1) summary
    pfam15696
    Location:143181
    RAD51_interact; RAD51 interacting motif