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AMZ2P1 AMZ2 pseudogene 1 [ Homo sapiens (human) ]

Gene ID: 201283, updated on 10-Oct-2023

Summary

Official Symbol
AMZ2P1provided by HGNC
Official Full Name
AMZ2 pseudogene 1provided by HGNC
Primary source
HGNC:HGNC:26491
See related
Ensembl:ENSG00000291140 AllianceGenome:HGNC:26491
Gene type
pseudo
RefSeq status
VALIDATED
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Expression
Broad expression in testis (RPKM 9.7), ovary (RPKM 5.2) and 24 other tissues See more
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Genomic context

See AMZ2P1 in Genome Data Viewer
Location:
17q24.1
Exon count:
5
Annotation release Status Assembly Chr Location
RS_2023_10 current GRCh38.p14 (GCF_000001405.40) 17 NC_000017.11 (64966550..64975585, complement)
RS_2023_10 current T2T-CHM13v2.0 (GCF_009914755.1) 17 NC_060941.1 (65836519..65845554, complement)
105.20220307 previous assembly GRCh37.p13 (GCF_000001405.25) 17 NC_000017.10 (62962668..62971703, complement)

Chromosome 17 - NC_000017.11Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC105376844 Neighboring gene leucine rich repeat containing 37 member A3 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 8853 Neighboring gene H3K27ac hESC enhancer GRCh37_chr17:62915421-62915921 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr17:62915997-62916498 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr17:62916499-62916998 Neighboring gene RDM1 pseudogene 4 Neighboring gene Sharpr-MPRA regulatory region 3243 Neighboring gene uncharacterized LOC107985000 Neighboring gene SLC16A6 pseudogene 1 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 12602 Neighboring gene ReSE screen-validated silencer GRCh37_chr17:62962191-62962354 Neighboring gene Sharpr-MPRA regulatory region 14154 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 8856 Neighboring gene H3K27ac hESC enhancer GRCh37_chr17:62971753-62972623 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 12603 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 12604 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 12605 Neighboring gene uncharacterized LOC124904044 Neighboring gene H3K27ac hESC enhancer GRCh37_chr17:63023805-63024744 Neighboring gene H3K27ac hESC enhancer GRCh37_chr17:63024745-63025684 Neighboring gene G protein subunit alpha 13 Neighboring gene NANOG hESC enhancer GRCh37_chr17:63043783-63044416 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 8858 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 8859

Genomic regions, transcripts, and products

Expression

  • Project title: HPA RNA-seq normal tissues
  • Description: RNA-seq was performed of tissue samples from 95 human individuals representing 27 different tissues in order to determine tissue-specificity of all protein-coding genes
  • BioProject: PRJEB4337
  • Publication: PMID 24309898
  • Analysis date: Wed Apr 4 07:08:55 2018

Interactions

Products Interactant Other Gene Complex Source Pubs Description

General gene information

Markers

Other Names

  • archaelysin family metallopeptidase 2 pseudogene 1
  • putative archaemetzincin-2-like protein

Clone Names

  • FLJ32065, MGC90301, DKFZp686D22101

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

RNA

  1. NR_026903.1 RNA Sequence

    Status: VALIDATED

    Source sequence(s)
    AC037487, AK056627, AK311317
    Related
    ENST00000430983.6

RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2023_10

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p14 Primary Assembly

Genomic

  1. NC_000017.11 Reference GRCh38.p14 Primary Assembly

    Range
    64966550..64975585 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Alternate T2T-CHM13v2.0

Genomic

  1. NC_060941.1 Alternate T2T-CHM13v2.0

    Range
    65836519..65845554 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Suppressed Reference Sequence(s)

The following Reference Sequences have been suppressed. Explain

  1. NM_153032.1: Suppressed sequence

    Description
    NM_153032.1: This RefSeq was permanently suppressed because it represents the wrong CDS.