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AMZ2 archaelysin family metallopeptidase 2 [ Homo sapiens (human) ]

Gene ID: 51321, updated on 12-Sep-2020

Summary

Official Symbol
AMZ2provided by HGNC
Official Full Name
archaelysin family metallopeptidase 2provided by HGNC
Primary source
HGNC:HGNC:28041
See related
Ensembl:ENSG00000196704 MIM:615169
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Summary
The protein encoded by this gene is a zinc metalloprotease that displays some activity against angiotensin-3. The encoded protein is inhibited by the aminopeptidase inhibitor amastatin, as well as by the general inhibitors o-phenanthroline and batimastat. Defects in this gene may be associated with lung tumorigenesis. [provided by RefSeq, Oct 2016]
Expression
Broad expression in testis (RPKM 44.9), brain (RPKM 18.1) and 25 other tissues See more
Orthologs

Genomic context

See AMZ2 in Genome Data Viewer
Location:
17q24.2
Exon count:
10
Annotation release Status Assembly Chr Location
109.20200815 current GRCh38.p13 (GCF_000001405.39) 17 NC_000017.11 (68206129..68257164)
105 previous assembly GRCh37.p13 (GCF_000001405.25) 17 NC_000017.10 (66202127..66253305)

Chromosome 17 - NC_000017.11Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC105371870 Neighboring gene Rho GTPase activating protein 27 pseudogene 2 Neighboring gene solute carrier family 16 member 6 Neighboring gene arylsulfatase G Neighboring gene tRNA-undetermined (NNN) 5-1

Genomic regions, transcripts, and products

Expression

  • Project title: HPA RNA-seq normal tissues
  • Description: RNA-seq was performed of tissue samples from 95 human individuals representing 27 different tissues in order to determine tissue-specificity of all protein-coding genes
  • BioProject: PRJEB4337
  • Publication: PMID 24309898
  • Analysis date: Wed Apr 4 07:08:55 2018

Interactions

Products Interactant Other Gene Complex Source Pubs Description

General gene information

Markers

Homology

Gene Ontology Provided by GOA

Function Evidence Code Pubs
metal ion binding IEA
Inferred from Electronic Annotation
more info
 
metallopeptidase activity IEA
Inferred from Electronic Annotation
more info
 
Process Evidence Code Pubs
proteolysis IEA
Inferred from Electronic Annotation
more info
 
Component Evidence Code Pubs
cellular_component ND
No biological Data available
more info
 

General protein information

Preferred Names
archaemetzincin-2
Names
archaemetzincins-2
archeobacterial metalloproteinase-like protein 2
NP_001028741.1
NP_001028742.1
NP_001028743.1
NP_001028744.1
NP_001028746.1
NP_001275983.1
NP_001275985.1
NP_001333400.1
NP_001333401.1
NP_001333402.1
NP_001333403.1
NP_001333404.1
NP_001333405.1
NP_001333406.1
NP_001333407.1
NP_001333408.1
NP_001333409.1
NP_001333410.1
NP_001333411.1
NP_001333412.1
NP_001333413.1
NP_001333414.1
NP_057711.3
XP_006722003.1
XP_024306554.1
XP_024306555.1
XP_024306556.1
XP_024306557.1
XP_024306558.1

NCBI Reference Sequences (RefSeq)

RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

Genomic

  1. NG_051827.1 RefSeqGene

    Range
    46915..56027
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_001033569.2NP_001028741.1  archaemetzincin-2 isoform 1

    See identical proteins and their annotated locations for NP_001028741.1

    Status: REVIEWED

    Description
    Transcript Variant: This variant (2) differs in the 5' UTR compared to variant 1. Variants 1-5 and 7-17 all encode the same isoform (1).
    Source sequence(s)
    AC005332, BE543044, BF978559
    Consensus CDS
    CCDS11674.1
    UniProtKB/Swiss-Prot
    Q86W34
    Related
    ENSP00000376481.2, ENST00000392720.6
    Conserved Domains (1) summary
    cd11375
    Location:89297
    Peptidase_M54; Peptidase family M54, also called archaemetzincins or archaelysins
  2. NM_001033570.2NP_001028742.1  archaemetzincin-2 isoform 1

    See identical proteins and their annotated locations for NP_001028742.1

    Status: REVIEWED

    Description
    Transcript Variant: This variant (3) differs in the 5' UTR compared to variant 1. Variants 1-5 and 7-17 all encode the same isoform (1).
    Source sequence(s)
    AC005332, BE543044, CN278872
    Consensus CDS
    CCDS11674.1
    UniProtKB/Swiss-Prot
    Q86W34
    Conserved Domains (1) summary
    cd11375
    Location:89297
    Peptidase_M54; Peptidase family M54, also called archaemetzincins or archaelysins
  3. NM_001033571.1NP_001028743.1  archaemetzincin-2 isoform 1

    See identical proteins and their annotated locations for NP_001028743.1

    Status: REVIEWED

    Description
    Transcript Variant: This variant (4) differs in the 5' UTR compared to variant 1. Variants 1-5 and 7-17 all encode the same isoform (1).
    Source sequence(s)
    AC005332, BE543044, BF978559, BM450564
    Consensus CDS
    CCDS11674.1
    UniProtKB/Swiss-Prot
    Q86W34
    Conserved Domains (1) summary
    cd11375
    Location:89297
    Peptidase_M54; Peptidase family M54, also called archaemetzincins or archaelysins
  4. NM_001033572.1NP_001028744.1  archaemetzincin-2 isoform 1

    See identical proteins and their annotated locations for NP_001028744.1

    Status: REVIEWED

    Description
    Transcript Variant: This variant (5) differs in the 5' UTR compared to variant 1. Variants 1-5 and 7-17 all encode the same isoform (1).
    Source sequence(s)
    AC005332, BE543044, BF978559
    Consensus CDS
    CCDS11674.1
    UniProtKB/Swiss-Prot
    Q86W34
    Related
    ENSP00000463012.1, ENST00000580753.5
    Conserved Domains (1) summary
    cd11375
    Location:89297
    Peptidase_M54; Peptidase family M54, also called archaemetzincins or archaelysins
  5. NM_001033574.2NP_001028746.1  archaemetzincin-2 isoform 2

    Status: REVIEWED

    Description
    Transcript Variant: This variant (6) lacks an alternate in-frame exon compared to variant 1. The resulting isoform (2) has the same N- and C-termini but is shorter compared to isoform 1. Variants 2 and 18 both encode the same isoform (2).
    Source sequence(s)
    AC005332, AK126146, AW028610
    Consensus CDS
    CCDS32714.1
    UniProtKB/Swiss-Prot
    Q86W34
    Related
    ENSP00000352831.4, ENST00000359783.8
    Conserved Domains (1) summary
    cd11375
    Location:95239
    Peptidase_M54; Peptidase family M54, also called archaemetzincins or archaelysins
  6. NM_001289054.2NP_001275983.1  archaemetzincin-2 isoform 1

    See identical proteins and their annotated locations for NP_001275983.1

    Status: REVIEWED

    Description
    Transcript Variant: This variant (7) differs in the 5' UTR compared to variant 1. Variants 1-5 and 7-17 all encode the same isoform (1).
    Source sequence(s)
    AC005332, BC050709
    Consensus CDS
    CCDS11674.1
    UniProtKB/Swiss-Prot
    Q86W34
    Conserved Domains (1) summary
    cd11375
    Location:89297
    Peptidase_M54; Peptidase family M54, also called archaemetzincins or archaelysins
  7. NM_001289056.2NP_001275985.1  archaemetzincin-2 isoform 1

    See identical proteins and their annotated locations for NP_001275985.1

    Status: REVIEWED

    Description
    Transcript Variant: This variant (8) differs in the 5' UTR compared to variant 1. Variants 1-5 and 7-17 all encode the same isoform (1).
    Source sequence(s)
    AC005332, AF208856, BC050709, CN278874
    Consensus CDS
    CCDS11674.1
    UniProtKB/Swiss-Prot
    Q86W34
    Related
    ENSP00000483162.1, ENST00000612294.4
    Conserved Domains (1) summary
    cd11375
    Location:89297
    Peptidase_M54; Peptidase family M54, also called archaemetzincins or archaelysins
  8. NM_001346471.1NP_001333400.1  archaemetzincin-2 isoform 1

    Status: REVIEWED

    Description
    Transcript Variant: This variant (9), as well as variants 1-5, 7-8, and 10-17, encodes isoform 1.
    Source sequence(s)
    AC005332
    Consensus CDS
    CCDS11674.1
    UniProtKB/Swiss-Prot
    Q86W34
    Related
    ENSP00000464635.1, ENST00000577985.5
    Conserved Domains (1) summary
    cd11375
    Location:89297
    Peptidase_M54; Peptidase family M54, also called archaemetzincins or archaelysins
  9. NM_001346472.1NP_001333401.1  archaemetzincin-2 isoform 1

    Status: REVIEWED

    Description
    Transcript Variant: This variant (10), as well as variants 1-5, 7-9, and 11-17, encodes isoform 1.
    Source sequence(s)
    AC005332
    Consensus CDS
    CCDS11674.1
    UniProtKB/Swiss-Prot
    Q86W34
    Conserved Domains (1) summary
    cd11375
    Location:89297
    Peptidase_M54; Peptidase family M54, also called archaemetzincins or archaelysins
  10. NM_001346473.1NP_001333402.1  archaemetzincin-2 isoform 1

    Status: REVIEWED

    Description
    Transcript Variant: This variant (11), as well as variants 1-5, 7-10, and 12-17, encodes isoform 1.
    Source sequence(s)
    AC005332
    Consensus CDS
    CCDS11674.1
    UniProtKB/Swiss-Prot
    Q86W34
    Related
    ENSP00000501934.1, ENST00000674770.1
    Conserved Domains (1) summary
    cd11375
    Location:89297
    Peptidase_M54; Peptidase family M54, also called archaemetzincins or archaelysins
  11. NM_001346474.2NP_001333403.1  archaemetzincin-2 isoform 1

    Status: REVIEWED

    Description
    Transcript Variant: This variant (12), as well as variants 1-5, 7-11, and 13-17, encodes isoform 1.
    Source sequence(s)
    AC005332
    Consensus CDS
    CCDS11674.1
    UniProtKB/Swiss-Prot
    Q86W34
    Conserved Domains (1) summary
    cd11375
    Location:89297
    Peptidase_M54; Peptidase family M54, also called archaemetzincins or archaelysins
  12. NM_001346475.2NP_001333404.1  archaemetzincin-2 isoform 1

    Status: REVIEWED

    Description
    Transcript Variant: This variant (13), as well as variants 1-5, 7-12, and 14-17, encodes isoform 1.
    Source sequence(s)
    AC005332
    Consensus CDS
    CCDS11674.1
    UniProtKB/Swiss-Prot
    Q86W34
    Conserved Domains (1) summary
    cd11375
    Location:89297
    Peptidase_M54; Peptidase family M54, also called archaemetzincins or archaelysins
  13. NM_001346476.2NP_001333405.1  archaemetzincin-2 isoform 1

    Status: REVIEWED

    Description
    Transcript Variant: This variant (14), as well as variants 1-5, 7-13, and 15-17, encodes isoform 1.
    Source sequence(s)
    AC005332
    Consensus CDS
    CCDS11674.1
    UniProtKB/Swiss-Prot
    Q86W34
    Conserved Domains (1) summary
    cd11375
    Location:89297
    Peptidase_M54; Peptidase family M54, also called archaemetzincins or archaelysins
  14. NM_001346477.2NP_001333406.1  archaemetzincin-2 isoform 1

    Status: REVIEWED

    Description
    Transcript Variant: This variant (15), as well as variants 1-5, 7-14, and 16-17, encodes isoform 1.
    Source sequence(s)
    AC005332
    Consensus CDS
    CCDS11674.1
    UniProtKB/Swiss-Prot
    Q86W34
    Related
    ENSP00000464133.1, ENST00000577866.5
    Conserved Domains (1) summary
    cd11375
    Location:89297
    Peptidase_M54; Peptidase family M54, also called archaemetzincins or archaelysins
  15. NM_001346478.2NP_001333407.1  archaemetzincin-2 isoform 1

    Status: REVIEWED

    Description
    Transcript Variant: This variant (16), as well as variants 1-5, 7-15, and 17, encodes isoform 1.
    Source sequence(s)
    AC005332
    Consensus CDS
    CCDS11674.1
    UniProtKB/Swiss-Prot
    Q86W34
    Conserved Domains (1) summary
    cd11375
    Location:89297
    Peptidase_M54; Peptidase family M54, also called archaemetzincins or archaelysins
  16. NM_001346479.2NP_001333408.1  archaemetzincin-2 isoform 1

    Status: REVIEWED

    Description
    Transcript Variant: This variant (17), as well as variants 1-5 and 7-16, encodes isoform 1.
    Source sequence(s)
    AC005332
    Consensus CDS
    CCDS11674.1
    UniProtKB/Swiss-Prot
    Q86W34
    Conserved Domains (1) summary
    cd11375
    Location:89297
    Peptidase_M54; Peptidase family M54, also called archaemetzincins or archaelysins
  17. NM_001346480.1NP_001333409.1  archaemetzincin-2 isoform 2

    Status: REVIEWED

    Description
    Transcript Variant: This variant (18), as well as variant 6, encodes isoform 2.
    Source sequence(s)
    AC005332
    Consensus CDS
    CCDS32714.1
    UniProtKB/Swiss-Prot
    Q86W34
  18. NM_001346481.1NP_001333410.1  archaemetzincin-2 isoform 3

    Status: REVIEWED

    Description
    Transcript Variant: This variant (19), as well as variants 20-22, encodes isoform 3.
    Source sequence(s)
    AC005332
    Conserved Domains (1) summary
    cd11375
    Location:69263
    Peptidase_M54; Peptidase family M54, also called archaemetzincins or archaelysins
  19. NM_001346482.1NP_001333411.1  archaemetzincin-2 isoform 3

    Status: REVIEWED

    Description
    Transcript Variant: This variant (20), as well as variants 19 and 21-22, encodes isoform 3.
    Source sequence(s)
    AC005332
    Conserved Domains (1) summary
    cd11375
    Location:69263
    Peptidase_M54; Peptidase family M54, also called archaemetzincins or archaelysins
  20. NM_001346483.2NP_001333412.1  archaemetzincin-2 isoform 3

    Status: REVIEWED

    Description
    Transcript Variant: This variant (21), as well as variants 19-20 and 22, encodes isoform 3.
    Source sequence(s)
    AC005332
    Conserved Domains (1) summary
    cd11375
    Location:69263
    Peptidase_M54; Peptidase family M54, also called archaemetzincins or archaelysins
  21. NM_001346484.2NP_001333413.1  archaemetzincin-2 isoform 3

    Status: REVIEWED

    Description
    Transcript Variant: This variant (22), as well as variants 19-21, encodes isoform 3.
    Source sequence(s)
    AC005332
    Conserved Domains (1) summary
    cd11375
    Location:69263
    Peptidase_M54; Peptidase family M54, also called archaemetzincins or archaelysins
  22. NM_001346485.2NP_001333414.1  archaemetzincin-2 isoform 4

    Status: REVIEWED

    Source sequence(s)
    AC005332
  23. NM_016627.5NP_057711.3  archaemetzincin-2 isoform 1

    See identical proteins and their annotated locations for NP_057711.3

    Status: REVIEWED

    Description
    Transcript Variant: This variant (1) encodes the longest isoform (1). Variants 1-5 and 7-17 all encode the same isoform (1).
    Source sequence(s)
    AK126146, BQ432895
    Consensus CDS
    CCDS11674.1
    UniProtKB/Swiss-Prot
    Q86W34
    Related
    ENSP00000352976.3, ENST00000359904.8
    Conserved Domains (1) summary
    cd11375
    Location:89297
    Peptidase_M54; Peptidase family M54, also called archaemetzincins or archaelysins

RNA

  1. NR_144442.2 RNA Sequence

    Status: REVIEWED

    Source sequence(s)
    AC005332
  2. NR_144443.2 RNA Sequence

    Status: REVIEWED

    Source sequence(s)
    AC005332

RefSeqs of Annotated Genomes: Homo sapiens Updated Annotation Release 109.20200815

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p13 Primary Assembly

Genomic

  1. NC_000017.11 Reference GRCh38.p13 Primary Assembly

    Range
    68206129..68257164
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_024450788.1XP_024306556.1  archaemetzincin-2 isoform X2

    Conserved Domains (1) summary
    cd11375
    Location:89297
    Peptidase_M54; Peptidase family M54, also called archaemetzincins or archaelysins
  2. XM_024450789.1XP_024306557.1  archaemetzincin-2 isoform X3

    Conserved Domains (1) summary
    cd11375
    Location:69263
    Peptidase_M54; Peptidase family M54, also called archaemetzincins or archaelysins
  3. XM_006721940.2XP_006722003.1  archaemetzincin-2 isoform X3

    See identical proteins and their annotated locations for XP_006722003.1

    Conserved Domains (1) summary
    cd11375
    Location:69263
    Peptidase_M54; Peptidase family M54, also called archaemetzincins or archaelysins
  4. XM_024450786.1XP_024306554.1  archaemetzincin-2 isoform X2

    Conserved Domains (1) summary
    cd11375
    Location:89297
    Peptidase_M54; Peptidase family M54, also called archaemetzincins or archaelysins
  5. XM_024450787.1XP_024306555.1  archaemetzincin-2 isoform X2

    Conserved Domains (1) summary
    cd11375
    Location:89297
    Peptidase_M54; Peptidase family M54, also called archaemetzincins or archaelysins
  6. XM_024450790.1XP_024306558.1  archaemetzincin-2 isoform X3

    Conserved Domains (1) summary
    cd11375
    Location:69263
    Peptidase_M54; Peptidase family M54, also called archaemetzincins or archaelysins
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