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ZNF385C zinc finger protein 385C [ Homo sapiens (human) ]

Gene ID: 201181, updated on 23-Nov-2021

Summary

Official Symbol
ZNF385Cprovided by HGNC
Official Full Name
zinc finger protein 385Cprovided by HGNC
Primary source
HGNC:HGNC:33722
See related
Ensembl:ENSG00000187595
Gene type
protein coding
RefSeq status
VALIDATED
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Expression
Ubiquitous expression in placenta (RPKM 4.2), testis (RPKM 3.8) and 25 other tissues See more
Orthologs
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Genomic context

See ZNF385C in Genome Data Viewer
Location:
17q21.2
Exon count:
12
Annotation release Status Assembly Chr Location
109.20211119 current GRCh38.p13 (GCF_000001405.39) 17 NC_000017.11 (42025576..42098473, complement)
105.20201022 previous assembly GRCh37.p13 (GCF_000001405.25) 17 NC_000017.10 (40177594..40250491, complement)

Chromosome 17 - NC_000017.11Genomic Context describing neighboring genes Neighboring gene outer dynein arm docking complex subunit 4 Neighboring gene 2',3'-cyclic nucleotide 3' phosphodiesterase Neighboring gene DnaJ heat shock protein family (Hsp40) member C7 Neighboring gene NFKB inhibitor interacting Ras like 2 Neighboring gene chromosome 17 open reading frame 113 Neighboring gene DExH-box helicase 58 Neighboring gene lysine acetyltransferase 2A

Genomic regions, transcripts, and products

Expression

  • Project title: HPA RNA-seq normal tissues
  • Description: RNA-seq was performed of tissue samples from 95 human individuals representing 27 different tissues in order to determine tissue-specificity of all protein-coding genes
  • BioProject: PRJEB4337
  • Publication: PMID 24309898
  • Analysis date: Wed Apr 4 07:08:55 2018

Interactions

Products Interactant Other Gene Complex Source Pubs Description

General gene information

Markers

Homology

Gene Ontology Provided by GOA

Function Evidence Code Pubs
enables nucleic acid binding IEA
Inferred from Electronic Annotation
more info
 
enables protein binding IPI
Inferred from Physical Interaction
more info
PubMed 
enables zinc ion binding IEA
Inferred from Electronic Annotation
more info
 
Component Evidence Code Pubs
is_active_in nucleus IBA
Inferred from Biological aspect of Ancestor
more info
PubMed 

General protein information

Preferred Names
zinc finger protein 385C
Names
CTD-2132N18.2
CTD-2132N18.4

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001378270.1NP_001365199.1  zinc finger protein 385C isoform 2

    Status: VALIDATED

    Source sequence(s)
    AC105024
    Conserved Domains (3) summary
    smart00451
    Location:4574
    ZnF_U1; U1-like zinc finger
    sd00020
    Location:303371
    ZF_C2H2; C2H2 Zn finger [structural motif]
    pfam12874
    Location:370394
    zf-met; Zinc-finger of C2H2 type
  2. NM_001392013.1NP_001378942.1  zinc finger protein 385C isoform 1

    Status: VALIDATED

    Source sequence(s)
    AC105024
    Conserved Domains (3) summary
    smart00451
    Location:4574
    ZnF_U1; U1-like zinc finger
    sd00020
    Location:304372
    ZF_C2H2; C2H2 Zn finger [structural motif]
    pfam12874
    Location:371395
    zf-met; Zinc-finger of C2H2 type
  3. NM_001392014.1NP_001378943.1  zinc finger protein 385C isoform 3

    Status: VALIDATED

    Source sequence(s)
    AC105024
    Conserved Domains (3) summary
    smart00451
    Location:4574
    ZnF_U1; U1-like zinc finger
    sd00020
    Location:302370
    ZF_C2H2; C2H2 Zn finger [structural motif]
    pfam12874
    Location:369393
    zf-met; Zinc-finger of C2H2 type
  4. NM_001392015.1NP_001378944.1  zinc finger protein 385C isoform 4

    Status: VALIDATED

    Source sequence(s)
    AC105024
    Conserved Domains (3) summary
    smart00451
    Location:4574
    ZnF_U1; U1-like zinc finger
    sd00020
    Location:304372
    ZF_C2H2; C2H2 Zn finger [structural motif]
    pfam12874
    Location:371395
    zf-met; Zinc-finger of C2H2 type
  5. NM_001392016.1NP_001378945.1  zinc finger protein 385C isoform 4

    Status: VALIDATED

    Source sequence(s)
    AC105024
    Conserved Domains (3) summary
    smart00451
    Location:4574
    ZnF_U1; U1-like zinc finger
    sd00020
    Location:304372
    ZF_C2H2; C2H2 Zn finger [structural motif]
    pfam12874
    Location:371395
    zf-met; Zinc-finger of C2H2 type
  6. NM_001392017.1NP_001378946.1  zinc finger protein 385C isoform 5

    Status: VALIDATED

    Source sequence(s)
    AC105024
    Conserved Domains (2) summary
    sd00020
    Location:230298
    ZF_C2H2; C2H2 Zn finger [structural motif]
    pfam12874
    Location:297321
    zf-met; Zinc-finger of C2H2 type
  7. NM_001392018.1NP_001378947.1  zinc finger protein 385C isoform 6

    Status: VALIDATED

    Source sequence(s)
    AC105024
    Related
    ENSP00000480744.1, ENST00000618554.4
    Conserved Domains (2) summary
    sd00020
    Location:225293
    ZF_C2H2; C2H2 Zn finger [structural motif]
    pfam12874
    Location:292316
    zf-met; Zinc-finger of C2H2 type
  8. NM_001393562.1NP_001380491.1  zinc finger protein 385C isoform 7

    Status: VALIDATED

    Source sequence(s)
    AC105024
    Related
    ENSP00000411514.4, ENST00000436535.4
    Conserved Domains (2) summary
    smart00451
    Location:160187
    ZnF_U1; U1-like zinc finger
    sd00020
    Location:305373
    ZF_C2H2; C2H2 Zn finger [structural motif]

RefSeqs of Annotated Genomes: Homo sapiens Updated Annotation Release 109.20211119

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p13 Primary Assembly

Genomic

  1. NC_000017.11 Reference GRCh38.p13 Primary Assembly

    Range
    42025576..42098473 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Suppressed Reference Sequence(s)

The following Reference Sequences have been suppressed. Explain

  1. NM_001013624.2: Suppressed sequence

    Description
    NM_001013624.2: This RefSeq was permanently suppressed because currently there is insufficient support for the transcript and the protein.
  2. NM_001242704.1: Suppressed sequence

    Description
    NM_001242704.1: This RefSeq was removed because currently there is insufficient support for the transcript and the protein.
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