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Rps8 ribosomal protein S8 [ Mus musculus (house mouse) ]

Gene ID: 20116, updated on 5-Aug-2018

Summary

Official Symbol
Rps8provided by MGI
Official Full Name
ribosomal protein S8provided by MGI
Primary source
MGI:MGI:98166
See related
Ensembl:ENSMUSG00000047675 Vega:OTTMUSG00000009917
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Mus musculus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
Expression
Ubiquitous expression in CNS E11.5 (RPKM 565.9), liver E14 (RPKM 526.6) and 28 other tissues See more
Orthologs

Genomic context

See Rps8 in Genome Data Viewer
Location:
4; 4 D1
Exon count:
6
Annotation release Status Assembly Chr Location
106 current GRCm38.p4 (GCF_000001635.24) 4 NC_000070.6 (117153836..117156132, complement)
Build 37.2 previous assembly MGSCv37 (GCF_000001635.18) 4 NC_000070.5 (116826441..116828737, complement)

Chromosome 4 - NC_000070.6Genomic Context describing neighboring genes Neighboring gene bestrophin 4, pseudogene Neighboring gene polymerase (RNA) II (DNA directed) polypeptide L pseudogene Neighboring gene small nucleolar RNA, C/D box 38A Neighboring gene small nucleolar RNA, C/D box 55 Neighboring gene kinesin family member 2C Neighboring gene armadillo-like helical domain containing 1 Neighboring gene transmembrane protein 53

Genomic regions, transcripts, and products

Expression

  • Project title: Mouse ENCODE transcriptome data
  • Description: RNA profiling data sets generated by the Mouse ENCODE project.
  • BioProject: PRJNA66167
  • Publication: PMID 25409824
  • Analysis date: n/a

Pathways from BioSystems

Interactions

Products Interactant Other Gene Complex Source Pubs Description

General gene information

Homology

Clone Names

  • MGC107577

Gene Ontology Provided by MGI

Function Evidence Code Pubs
structural constituent of ribosome IBA
Inferred from Biological aspect of Ancestor
more info
PubMed 
Process Evidence Code Pubs
maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA) IBA
Inferred from Biological aspect of Ancestor
more info
PubMed 
translation IEA
Inferred from Electronic Annotation
more info
 
Component Evidence Code Pubs
cytoplasm IEA
Inferred from Electronic Annotation
more info
 
cytosol ISO
Inferred from Sequence Orthology
more info
 
cytosolic small ribosomal subunit IBA
Inferred from Biological aspect of Ancestor
more info
PubMed 
cytosolic small ribosomal subunit ISO
Inferred from Sequence Orthology
more info
 
endoplasmic reticulum ISO
Inferred from Sequence Orthology
more info
 
intracellular IEA
Inferred from Electronic Annotation
more info
 
membrane IEA
Inferred from Electronic Annotation
more info
 
ribonucleoprotein complex ISO
Inferred from Sequence Orthology
more info
 
ribosome IEA
Inferred from Electronic Annotation
more info
 

NCBI Reference Sequences (RefSeq)

RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_009098.2NP_033124.1  40S ribosomal protein S8

    See identical proteins and their annotated locations for NP_033124.1

    Status: PROVISIONAL

    Source sequence(s)
    AK010650
    Consensus CDS
    CCDS18530.1
    UniProtKB/Swiss-Prot
    P62242
    UniProtKB/TrEMBL
    Q497E9
    Related
    ENSMUSP00000099757.4, OTTMUSP00000010506, ENSMUST00000102696.4, OTTMUST00000023028
    Conserved Domains (1) summary
    PTZ00148
    Location:1206
    PTZ00148; 40S ribosomal protein S8; Provisional

RefSeqs of Annotated Genomes: Mus musculus Annotation Release 106

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCm38.p4 C57BL/6J

Genomic

  1. NC_000070.6 Reference GRCm38.p4 C57BL/6J

    Range
    117153836..117156132 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
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