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cfh-1 [ Caenorhabditis elegans ]

Gene ID: 185381, updated on 11-Sep-2024

Summary

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Official Symbol
cfh-1
Primary source
WormBase:WBGene00009500
Locus tag
CELE_F36H2.3
See related
AllianceGenome:WB:WBGene00009500
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Caenorhabditis elegans (strain: Bristol N2)
Lineage
Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis
Summary
Is expressed in nervous system and vulva. Human ortholog(s) of this gene implicated in malaria. Orthologous to human CR1 (complement C3b/C4b receptor 1 (Knops blood group)). [provided by Alliance of Genome Resources, Apr 2022]
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Genomic context

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Location:
chromosome: I
Exon count:
25
Sequence:
Chromosome: I; NC_003279.8 (9251838..9261669, complement)

Chromosome I - NC_003279.8Genomic Context describing neighboring genes Neighboring gene DUF4956 domain-containing protein Neighboring gene Transmembrane protein Neighboring gene EGF-like domain-containing protein Neighboring gene tRNA-Arg Neighboring gene tRNA-Pro Neighboring gene ncRNA

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_003279.8

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Genome sequence of the nematode C. elegans: a platform for investigating biology. C. elegans Sequencing Consortium. Science, 1998 Dec 11. PMID 9851916

GeneRIFs: Gene References Into Functions

General gene information

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Markers

Homology

General protein information

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Preferred Names
Sushi domain-containing protein
NP_001251039.1
  • Confirmed by transcript evidence
NP_001251041.1
  • Confirmed by transcript evidence
NP_001251043.1
  • Confirmed by transcript evidence
NP_001335525.1
  • Confirmed by transcript evidence
NP_001335526.1
  • Confirmed by transcript evidence
NP_001359596.1
  • Confirmed by transcript evidence
NP_001360153.1
  • Confirmed by transcript evidence
NP_001368096.1
  • Confirmed by transcript evidence
NP_001368097.1
  • Confirmed by transcript evidence
NP_001382270.1
  • Confirmed by transcript evidence
NP_001382271.1
  • Confirmed by transcript evidence

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003279.8 Reference assembly

    Range
    9251838..9261669 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_001348615.3 → NP_001335526.1  Sushi domain-containing protein [Caenorhabditis elegans]

    Status: REVIEWED

    UniProtKB/TrEMBL
    A0A1N7SYV9
    Conserved Domains (3) summary
    cd00033
    Location:1409 → 1467
    CCP; Complement control protein (CCP) modules (aka short consensus repeats SCRs or SUSHI repeats) have been identified in several proteins of the complement system
    pfam00084
    Location:1580 → 1634
    Sushi; Sushi repeat (SCR repeat)
    cl27761
    Location:673 → 910
    CCP; Complement control protein (CCP) modules (aka short consensus repeats SCRs or SUSHI repeats) have been identified in several proteins of the complement system

  2. NM_001348616.3 → NP_001335525.1  Sushi domain-containing protein [Caenorhabditis elegans]

    Status: REVIEWED

    UniProtKB/TrEMBL
    A0A1N7SYP5
    Conserved Domains (3) summary
    cd00033
    Location:1549 → 1607
    CCP; Complement control protein (CCP) modules (aka short consensus repeats SCRs or SUSHI repeats) have been identified in several proteins of the complement system
    pfam00084
    Location:1720 → 1774
    Sushi; Sushi repeat (SCR repeat)
    cl27761
    Location:673 → 910
    CCP; Complement control protein (CCP) modules (aka short consensus repeats SCRs or SUSHI repeats) have been identified in several proteins of the complement system

  3. NM_001373348.2 → NP_001360153.1  Sushi domain-containing protein [Caenorhabditis elegans]

    Status: REVIEWED

    UniProtKB/TrEMBL
    H2L2E9
    Conserved Domains (2) summary
    cd00033
    Location:193 → 246
    CCP; Complement control protein (CCP) modules (aka short consensus repeats SCRs or SUSHI repeats) have been identified in several proteins of the complement system
    PHA02927
    Location:673 → 910
    PHA02927; secreted complement-binding protein; Provisional

  4. NM_001373341.1 → NP_001359596.1  Sushi domain-containing protein [Caenorhabditis elegans]

    Status: REVIEWED

    UniProtKB/TrEMBL
    Q7JL32
    Conserved Domains (3) summary
    cd00033
    Location:348 → 406
    CCP; Complement control protein (CCP) modules (aka short consensus repeats SCRs or SUSHI repeats) have been identified in several proteins of the complement system
    PHA02831
    Location:275 → 405
    PHA02831; EEV host range protein; Provisional
    PHA02927
    Location:665 → 902
    PHA02927; secreted complement-binding protein; Provisional

  5. NM_001395349.1 → NP_001382271.1  Sushi domain-containing protein [Caenorhabditis elegans]

    Status: REVIEWED

    UniProtKB/TrEMBL
    A0A8D8EK13
    Conserved Domains (3) summary
    cd00033
    Location:1540 → 1598
    CCP; Complement control protein (CCP) modules (aka short consensus repeats SCRs or SUSHI repeats) have been identified in several proteins of the complement system
    PHA02831
    Location:275 → 405
    PHA02831; EEV host range protein; Provisional
    PHA02927
    Location:664 → 901
    PHA02927; secreted complement-binding protein; Provisional

  6. NM_001395350.1 → NP_001382270.1  Sushi domain-containing protein [Caenorhabditis elegans]

    Status: REVIEWED

    UniProtKB/TrEMBL
    A0A8D8EJV9
    Conserved Domains (3) summary
    cd00033
    Location:348 → 406
    CCP; Complement control protein (CCP) modules (aka short consensus repeats SCRs or SUSHI repeats) have been identified in several proteins of the complement system
    PHA02831
    Location:275 → 405
    PHA02831; EEV host range protein; Provisional
    PHA02927
    Location:664 → 901
    PHA02927; secreted complement-binding protein; Provisional

  7. NM_001264110.3 → NP_001251039.1  Sushi domain-containing protein [Caenorhabditis elegans]

    See identical proteins and their annotated locations for NP_001251039.1

    Status: REVIEWED

    UniProtKB/TrEMBL
    H2L2F4
    Conserved Domains (2) summary
    cd00033
    Location:570 → 628
    CCP; Complement control protein (CCP) modules (aka short consensus repeats SCRs or SUSHI repeats) have been identified in several proteins of the complement system
    PHA02927
    Location:339 → 628
    PHA02927; secreted complement-binding protein; Provisional

  8. NM_001381014.1 → NP_001368097.1  Sushi domain-containing protein [Caenorhabditis elegans]

    Status: REVIEWED

    UniProtKB/TrEMBL
    H2L2F3
    Conserved Domains (4) summary
    cd00033
    Location:348 → 406
    CCP; Complement control protein (CCP) modules (aka short consensus repeats SCRs or SUSHI repeats) have been identified in several proteins of the complement system
    PHA02831
    Location:275 → 405
    PHA02831; EEV host range protein; Provisional
    PHA02927
    Location:524 → 699
    PHA02927; secreted complement-binding protein; Provisional
    NF033177
    Location:797 → 999
    auto_Ag43; autotransporter adhesin Ag43

  9. NM_001264112.3 → NP_001251041.1  Sushi domain-containing protein [Caenorhabditis elegans]

    See identical proteins and their annotated locations for NP_001251041.1

    Status: REVIEWED

    UniProtKB/TrEMBL
    H2L2F1
    Conserved Domains (2) summary
    cd00033
    Location:641 → 699
    CCP; Complement control protein (CCP) modules (aka short consensus repeats SCRs or SUSHI repeats) have been identified in several proteins of the complement system
    PHA02927
    Location:339 → 628
    PHA02927; secreted complement-binding protein; Provisional

  10. NM_001381017.1 → NP_001368096.1  Sushi domain-containing protein [Caenorhabditis elegans]

    Status: REVIEWED

    UniProtKB/TrEMBL
    H2L2F2
    Conserved Domains (3) summary
    cd00033
    Location:193 → 246
    CCP; Complement control protein (CCP) modules (aka short consensus repeats SCRs or SUSHI repeats) have been identified in several proteins of the complement system
    PHA02927
    Location:570 → 769
    PHA02927; secreted complement-binding protein; Provisional
    NF033177
    Location:867 → 1069
    auto_Ag43; autotransporter adhesin Ag43

  11. NM_001264114.3 → NP_001251043.1  Sushi domain-containing protein [Caenorhabditis elegans]

    See identical proteins and their annotated locations for NP_001251043.1

    Status: REVIEWED

    UniProtKB/TrEMBL
    H2L2F0
    Conserved Domains (2) summary
    cd00033
    Location:643 → 698
    CCP; Complement control protein (CCP) modules (aka short consensus repeats SCRs or SUSHI repeats) have been identified in several proteins of the complement system
    PHA02927
    Location:339 → 628
    PHA02927; secreted complement-binding protein; Provisional
Nucleotide Protein
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