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F13D11.4 3-beta hydroxysteroid dehydrogenase/isomerase domain-containing protein [ Caenorhabditis elegans ]

Gene ID: 184416, updated on 11-Apr-2024

Summary

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Gene symbol
F13D11.4
Gene description
3-beta hydroxysteroid dehydrogenase/isomerase domain-containing protein
Primary source
WormBase:WBGene00017429
Locus tag
CELE_F13D11.4
See related
AllianceGenome:WB:WBGene00017429
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Caenorhabditis elegans (strain: Bristol N2)
Lineage
Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis
Summary
Predicted to enable oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor. Predicted to be involved in steroid biosynthetic process. [provided by Alliance of Genome Resources, Apr 2022]
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Genomic context

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Location:
chromosome: X
Exon count:
11
Sequence:
Chromosome: X; NC_003284.9 (5831929..5834805, complement)

Chromosome X - NC_003284.9Genomic Context describing neighboring genes Neighboring gene ncRNA Neighboring gene C2H2-type domain-containing protein;Hunchback-like protein Neighboring gene ACid Phosphatase family Neighboring gene ncRNA Neighboring gene DAF-16/FOXO Controlled, germline Tumor affecting Neighboring gene ncRNA Neighboring gene ncRNA

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_003284.9

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. EPIC: software toolkit for elution profile-based inference of protein complexes. Hu LZ, et al. Nat Methods, 2019 Aug. PMID 31308550, Free PMC Article
  2. Genome sequence of the nematode C. elegans: a platform for investigating biology. C. elegans Sequencing Consortium. Science, 1998 Dec 11. PMID 9851916
  3. Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. Gaudet P, et al. Brief Bioinform, 2011 Sep. PMID 21873635, Free PMC Article

GeneRIFs: Gene References Into Functions

Interactions

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Products Interactant Other Gene Complex Source Pubs Description

General gene information

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Markers

Homology

Gene Ontology Provided by WormBase

Function Evidence Code Pubs
enables oxidoreductase activity IEA
Inferred from Electronic Annotation
more info
  
enables oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor IBA
Inferred from Biological aspect of Ancestor
more info
  

General protein information

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Preferred Names
3-beta hydroxysteroid dehydrogenase/isomerase domain-containing protein
NP_508978.3
  • Confirmed by transcript evidence

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003284.9 Reference assembly

    Range
    5831929..5834805 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_076577.11 → NP_508978.3  3-beta hydroxysteroid dehydrogenase/isomerase domain-containing protein [Caenorhabditis elegans]

    See identical proteins and their annotated locations for NP_508978.3

    Status: REVIEWED

    UniProtKB/TrEMBL
    Q19391
    Conserved Domains (1) summary
    cd05227
    Location:7 → 317
    AR_SDR_e; aldehyde reductase, extended (e) SDRs
Nucleotide Protein
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