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LOC18046431 WRKY transcription factor 22 [ Citrus x clementina ]

Gene ID: 18046431, updated on 21-Dec-2023

Summary

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Gene symbol
LOC18046431
Gene description
WRKY transcription factor 22
Locus tag
CICLE_v10024061mg
Gene type
protein coding
RefSeq status
MODEL
Organism
Citrus x clementina
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Sapindales; Rutaceae; Aurantioideae; Citrus
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Genomic context

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Location:
chromosome: Un
Exon count:
3
Annotation release Status Assembly Chr Location
100 current Citrus_clementina_v1.0 (GCF_000493195.1) Unplaced Scaffold NW_006262339.1 (1452787..1454127, complement)

NW_006262339.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC18050243 Neighboring gene endoglucanase Neighboring gene meiotic recombination protein SPO11-2 Neighboring gene uncharacterized LOC18046433

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_006262339 Unplaced Scaffold Reference Citrus_clementina_v1.0

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables DNA-binding transcription factor activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables transcription cis-regulatory region binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in regulation of DNA-templated transcription IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
WRKY transcription factor 22

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Citrus clementina Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Citrus_clementina_v1.0

Genomic

  1. NW_006262339.1 Reference Citrus_clementina_v1.0

    Range
    1452787..1454127 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_024189024.1 → XP_024044792.1  WRKY transcription factor 22 isoform X1

    UniProtKB/TrEMBL
    V4TM45
    Conserved Domains (1) summary
    smart00774
    Location:131 → 187
    WRKY; DNA binding domain

  2. XM_006439402.2 → XP_006439465.2  WRKY transcription factor 22 isoform X2

    UniProtKB/TrEMBL
    V4TM45
    Conserved Domains (1) summary
    smart00774
    Location:130 → 186
    WRKY; DNA binding domain
Nucleotide Protein
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