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Taxonomy browser (Citrus clementina)

Citrus clementina

Taxonomy ID: 85681 (for references in articles please use NCBI:txid85681)
Scientific name: Citrus clementina hort. ex Tanaka, 1954
NCBI BLAST® name: eudicots
Rank: species
Genetic code: Translation table 1 (Standard)
Mitochondrial genetic code: Translation table 1 (Standard)
Plastid genetic code: Translation table 11 (Bacterial, Archaeal and Plant Plastid)
Other names:
heterotypic synonym: Citrus deliciosa × Citrus sinensis
common name: clementine
Lineage( full )
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Sapindales; Rutaceae; Aurantioideae; Citrus
   Entrez records   
Database name Direct links
Nucleotide 210,409
Protein 67,245
Genome 1
Popset 227
GEO Datasets 25
UniGene 8,994
PubMed Central 338
Gene 31,256
SRA Experiments 50
Identical Protein Groups 45,619
Bio Project 16
Bio Sample 379
Bio Systems 256
Assembly 1
Clone DB 24,224
Probe 150
Taxonomy 1

Comments and References:

Nota BeneGRIN (Aug 24, 2012)
Name accessed on 24 August 2012 in: USDA, ARS, National Genetic Resources Program. Germplasm Resources Information Network - (GRIN) [Online Database]. National Germplasm Resources Laboratory, Beltsville, Maryland.

Tanaka T 1954
Tanaka T. 1954. Species problem in Citrus: a critical study of wild and cultivated units of Citrus, based upon field studies in their native homes. Revisio Aurantiacearum IX. Japanese Society for the Promotion of Science, Tokyo. 152 pp.


Genome Information

Go to NCBI genomic BLAST® page for Citrus clementina
   Trace records (raw single-pass reads of DNA sequence)   
Sequencing Center Name
Record counts per type
WGS ALL
GSC - Genoscope
2,431,582 2,431,582
HAGSC - Hudson Alpha Genome Sequencing Center
1,418,766 1,418,766
IGA - Istituto di Genomica Applicata, Italy
476,916 476,916
Totals per type
4,327,264 4,327,264

External Information Resources (NCBI LinkOut)

LinkOut Subject LinkOut Provider
GOLD: Go0000336 organism-specific Genomes On Line Database
Show Biotic Interactions taxonomy/phylogenetic Global Biotic Interactions
2614208512: Citrus clementina organism-specific Integrated Microbial Genomes
Citrus clementina hort. ex Tanaka taxonomy/phylogenetic USDA-ARS GRIN Taxonomy
search W3TROPICOS taxonomy/phylogenetic Vascular Tropicos
WebScipio: Citrus clementina organism-specific WebScipio - eukaryotic gene identification
diArk: Citrus clementina organism-specific diArk - a resource for eukaryotic genome research
Notes:
Groups interested in participating in the LinkOut program should visit the LinkOut home page.
A list of our current non-bibliographic LinkOut providers can be found here.

Information from sequence entries

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Disclaimer: The NCBI taxonomy database is not an authoritative source for nomenclature or classification - please consult the relevant scientific literature for the most reliable information.


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