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LOC18038856 laccase-7 [ Citrus x clementina ]

Gene ID: 18038856, updated on 21-Dec-2023

Summary

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Gene symbol
LOC18038856
Gene description
laccase-7
Locus tag
CICLE_v10011375mg
Gene type
protein coding
RefSeq status
MODEL
Organism
Citrus x clementina
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Sapindales; Rutaceae; Aurantioideae; Citrus
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Genomic context

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Location:
chromosome: Un
Exon count:
6
Annotation release Status Assembly Chr Location
100 current Citrus_clementina_v1.0 (GCF_000493195.1) Unplaced Scaffold NW_006262139.1 (15354763..15357473, complement)

NW_006262139.1Genomic Context describing neighboring genes Neighboring gene fructose-1,6-bisphosphatase, chloroplastic Neighboring gene uncharacterized LOC18038855 Neighboring gene uncharacterized LOC18039996 Neighboring gene L-type lectin-domain containing receptor kinase VIII.2

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_006262139 Unplaced Scaffold Reference Citrus_clementina_v1.0

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables copper ion binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables hydroquinone:oxygen oxidoreductase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in lignin catabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in apoplast IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
laccase-7

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Citrus clementina Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Citrus_clementina_v1.0

Genomic

  1. NW_006262139.1 Reference Citrus_clementina_v1.0

    Range
    15354763..15357473 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_006429195.2 → XP_006429258.1  laccase-7

    See identical proteins and their annotated locations for XP_006429258.1

    UniProtKB/TrEMBL
    V4S508
    Conserved Domains (4) summary
    cd13849
    Location:28 → 144
    CuRO_1_LCC_plant; The first cupredoxin domain of plant laccases
    cd13875
    Location:159 → 308
    CuRO_2_LCC_plant; The second cupredoxin domain of the plant laccases
    cd13897
    Location:411 → 552
    CuRO_3_LCC_plant; The third cupredoxin domain of the plant laccases
    TIGR03389
    Location:23 → 569
    laccase; laccase, plant
Nucleotide Protein
Heading Accession and Version

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