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These reference sequences exist independently of genome builds. Explain
These reference sequences are curated independently of the genome
annotation cycle, so their versions may not match the RefSeq versions in the current
genome build. Identify version mismatches by comparing the version of the RefSeq in
this section to the one reported in Genomic regions,
transcripts, and products above.
mRNA and Protein(s)
-
NM_001039657.2 → NP_001034746.1 tesmin isoform a
See identical proteins and their annotated locations for NP_001034746.1
Status: VALIDATED
- Description
- Transcript Variant: This variant (1) encodes the longest isoform (a).
- Source sequence(s)
-
AK015724, AK015732, AK161511
- Consensus CDS
-
CCDS37880.1
- UniProtKB/Swiss-Prot
- Q548K4, Q8VIE0, Q8VIE1, Q9WTJ6
- Related
- ENSMUSP00000025840.10, ENSMUST00000025840.16
- Conserved Domains (1) summary
-
- pfam03638
Location:334 → 371
- TCR; Tesmin/TSO1-like CXC domain, cysteine-rich domain
-
NM_001039658.2 → NP_001034747.1 tesmin isoform b
See identical proteins and their annotated locations for NP_001034747.1
Status: VALIDATED
- Description
- Transcript Variant: This variant (2) lacks several exons, and its 3' terminal exon extends past a splice site that is used in variant 1. This results in a novel 3' coding region and 3' UTR, compared to variant 1. The encoded isoform (b) has a shorter and distinct C-terminus, compared to isoform a.
- Source sequence(s)
-
AK015732, AK161511
- Consensus CDS
-
CCDS50339.1
- UniProtKB/TrEMBL
-
Q9D571
- Related
- ENSMUSP00000114142.2, ENSMUST00000151341.8
-
NM_001286557.1 → NP_001273486.1 tesmin isoform c
See identical proteins and their annotated locations for NP_001273486.1
Status: VALIDATED
- Description
- Transcript Variant: This variant (3) differs in the 5' UTR and initiates translation at a downstream start codon, compared to variant 1. The encoded isoform (c) has a shorter N-terminus, compared to isoform a. Both variants 3 and 4 encode the same isoform.
- Source sequence(s)
-
AK015724, AK161511, AL626765
- Consensus CDS
-
CCDS70912.1
- UniProtKB/Swiss-Prot
-
Q9WTJ6
- Related
- ENSMUSP00000114171.2, ENSMUST00000142193.8
- Conserved Domains (1) summary
-
- pfam03638
Location:154 → 191
- TCR; Tesmin/TSO1-like CXC domain, cysteine-rich domain
-
NM_001286558.1 → NP_001273487.1 tesmin isoform c
See identical proteins and their annotated locations for NP_001273487.1
Status: VALIDATED
- Description
- Transcript Variant: This variant (4) differs in the 5' UTR and initiates translation at a downstream start codon, compared to variant 1. The encoded isoform (c) has a shorter N-terminus, compared to isoform a. Both variants 3 and 4 encode the same isoform.
- Source sequence(s)
-
AK015724, AK161511, AL626765
- Consensus CDS
-
CCDS70912.1
- UniProtKB/Swiss-Prot
-
Q9WTJ6
- Related
- ENSMUSP00000122687.2, ENSMUST00000127142.2
- Conserved Domains (1) summary
-
- pfam03638
Location:154 → 191
- TCR; Tesmin/TSO1-like CXC domain, cysteine-rich domain
The following sections contain reference sequences that belong to a
specific genome build. Explain
This section includes genomic Reference
Sequences (RefSeqs) from all assemblies on which this gene is annotated, such as
RefSeqs for chromosomes and scaffolds (contigs) from both reference and alternate
assemblies. Model RNAs and proteins are also reported here.
Reference GRCm39 C57BL/6J
Genomic
-
NC_000085.7 Reference GRCm39 C57BL/6J
- Range
-
3438857..3457823
- Download
- GenBank, FASTA, Sequence Viewer (Graphics)
The following Reference Sequences have been suppressed. Explain
These RefSeqs were suppressed for the
cited reason(s). Suppressed RefSeqs do not appear in BLAST databases, related
sequence links, or BLAST links (BLink), but may still be retrieved by clicking on
their accession.version below.
-
NM_010841.1: Suppressed sequence
- Description
- NM_010841.1: This RefSeq was permanently suppressed because currently there is insufficient support for the transcript.