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F56B3.11 Mitochondrial import inner membrane translocase subunit Tim21;TIM21-like protein, mitochondrial [ Caenorhabditis elegans ]

Gene ID: 176907, updated on 18-Sep-2024

Summary

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Official Symbol
F56B3.11
Official Full Name
Mitochondrial import inner membrane translocase subunit Tim21;TIM21-like protein, mitochondrial
Primary source
WormBase:WBGene00018934
Locus tag
CELE_F56B3.11
See related
AllianceGenome:WB:WBGene00018934
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Caenorhabditis elegans (strain: Bristol N2)
Lineage
Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis
Summary
Predicted to be involved in protein import into mitochondrial matrix. Predicted to be located in mitochondrial inner membrane. Predicted to be integral component of membrane. Predicted to be part of TIM23 mitochondrial import inner membrane translocase complex. Orthologous to human TIMM21 (translocase of inner mitochondrial membrane 21). [provided by Alliance of Genome Resources, Apr 2022]
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Genomic context

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Location:
chromosome: IV
Exon count:
3
Sequence:
Chromosome: IV; NC_003282.8 (795755..796571, complement)

Chromosome IV - NC_003282.8Genomic Context describing neighboring genes Neighboring gene RNA polymerase II-associated protein 1 N-terminal domain-containing protein;RPAP1_N domain-containing protein Neighboring gene Receptor expression-enhancing protein Neighboring gene Skp1-related protein Neighboring gene Enoyl-CoA hydratase, mitochondrial Neighboring gene ncRNA Neighboring gene Large ribosomal subunit protein mL46

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_003282.8

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Novel LOTUS-domain proteins are organizational hubs that recruit C. elegans Vasa to germ granules. Cipriani PG, et al. Elife, 2021 Jul 5. PMID 34223818, Free PMC Article
  2. Genome sequence of the nematode C. elegans: a platform for investigating biology. C. elegans Sequencing Consortium. Science, 1998 Dec 11. PMID 9851916
  3. Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. Gaudet P, et al. Brief Bioinform, 2011 Sep. PMID 21873635, Free PMC Article

GeneRIFs: Gene References Into Functions

Interactions

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Products Interactant Other Gene Complex Source Pubs Description

General gene information

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Homology

Gene Ontology Provided by WormBase

Process Evidence Code Pubs
involved_in protein import into mitochondrial matrix IBA
Inferred from Biological aspect of Ancestor
more info
  
involved_in protein import into mitochondrial matrix IEA
Inferred from Electronic Annotation
more info
  
involved_in protein transport IEA
Inferred from Electronic Annotation
more info
  
Component Evidence Code Pubs
part_of TIM23 mitochondrial import inner membrane translocase complex IBA
Inferred from Biological aspect of Ancestor
more info
  
part_of TIM23 mitochondrial import inner membrane translocase complex IEA
Inferred from Electronic Annotation
more info
  
located_in membrane IEA
Inferred from Electronic Annotation
more info
  
located_in mitochondrial inner membrane IEA
Inferred from Electronic Annotation
more info
  
located_in mitochondrion IEA
Inferred from Electronic Annotation
more info
  

General protein information

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Preferred Names
Mitochondrial import inner membrane translocase subunit Tim21;TIM21-like protein, mitochondrial
NP_499991.1
  • Confirmed by transcript evidence
NP_499992.1
  • Confirmed by transcript evidence

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003282.8 Reference assembly

    Range
    795755..796571 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_067590.5 → NP_499991.1  Mitochondrial import inner membrane translocase subunit Tim21 [Caenorhabditis elegans]

    See identical proteins and their annotated locations for NP_499991.1

    Status: REVIEWED

    UniProtKB/TrEMBL
    Q9TXR7
    Conserved Domains (1) summary
    pfam08294
    Location:73 → 213
    TIM21; TIM21

  2. NM_067591.6 → NP_499992.1  TIM21-like protein, mitochondrial [Caenorhabditis elegans]

    See identical proteins and their annotated locations for NP_499992.1

    Status: REVIEWED

    UniProtKB/TrEMBL
    H2L085
    Conserved Domains (1) summary
    cl21648
    Location:73 → 119
    Coa1; Cytochrome oxidase complex assembly protein 1
Nucleotide Protein
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