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CIDECP1 cell death inducing DFFA like effector c pseudogene 1 [ Homo sapiens (human) ]

Gene ID: 152302, updated on 23-Nov-2021

Summary

Official Symbol
CIDECP1provided by HGNC
Official Full Name
cell death inducing DFFA like effector c pseudogene 1provided by HGNC
Primary source
HGNC:HGNC:24230
See related
Ensembl:ENSG00000186162
Gene type
pseudo
RefSeq status
VALIDATED
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Also known as
CICE; CIDECP
Expression
Ubiquitous expression in bone marrow (RPKM 9.3), brain (RPKM 7.9) and 25 other tissues See more
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Genomic context

See CIDECP1 in Genome Data Viewer
Location:
3p25.3
Exon count:
3
Annotation release Status Assembly Chr Location
109.20211119 current GRCh38.p13 (GCF_000001405.39) 3 NC_000003.12 (10017553..10026136, complement)
105.20201022 previous assembly GRCh37.p13 (GCF_000001405.25) 3 NC_000003.11 (10059237..10067820, complement)

Chromosome 3 - NC_000003.12Genomic Context describing neighboring genes Neighboring gene ER membrane protein complex subunit 3 Neighboring gene EMC3 antisense RNA 1 Neighboring gene CYCS pseudogene 10 Neighboring gene microtubule affinity regulating kinase 2 pseudogene 2 Neighboring gene 3p25 FANCD2 Alu-mediated recombination region Neighboring gene FA complementation group D2 Neighboring gene RNA, U6 small nuclear 670, pseudogene Neighboring gene CYCS pseudogene 11

Genomic regions, transcripts, and products

Expression

  • Project title: HPA RNA-seq normal tissues
  • Description: RNA-seq was performed of tissue samples from 95 human individuals representing 27 different tissues in order to determine tissue-specificity of all protein-coding genes
  • BioProject: PRJEB4337
  • Publication: PMID 24309898
  • Analysis date: Wed Apr 4 07:08:55 2018

Interactions

Products Interactant Other Gene Complex Source Pubs Description

General gene information

Markers

Other Names

  • cell death-inducing CIDE-like effector pseudogene
  • cell death-inducing DFFA-like effector c pseudogene

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

RNA

  1. NR_002786.1 RNA Sequence

    Status: VALIDATED

    Source sequence(s)
    AF279614
    Related
    ENST00000433871.5

RefSeqs of Annotated Genomes: Homo sapiens Updated Annotation Release 109.20211119

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p13 Primary Assembly

Genomic

  1. NC_000003.12 Reference GRCh38.p13 Primary Assembly

    Range
    10017553..10026136 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
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