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Eci1 enoyl-Coenzyme A delta isomerase 1 [ Mus musculus (house mouse) ]

Gene ID: 13177, updated on 31-Jan-2019

Summary

Official Symbol
Eci1provided by MGI
Official Full Name
enoyl-Coenzyme A delta isomerase 1provided by MGI
Primary source
MGI:MGI:94871
See related
Ensembl:ENSMUSG00000024132
Gene type
protein coding
RefSeq status
VALIDATED
Organism
Mus musculus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
Also known as
Dci; eci
Expression
Broad expression in heart adult (RPKM 134.3), liver adult (RPKM 92.8) and 25 other tissues See more
Orthologs

Genomic context

See Eci1 in Genome Data Viewer
Location:
17; 17 A3.3
Exon count:
7
Annotation release Status Assembly Chr Location
106 current GRCm38.p4 (GCF_000001635.24) 17 NC_000083.6 (24426683..24439316)
Build 37.2 previous assembly MGSCv37 (GCF_000001635.18) 17 NC_000083.5 (24563628..24576261)

Chromosome 17 - NC_000083.6Genomic Context describing neighboring genes Neighboring gene ATP-binding cassette, sub-family A (ABC1), member 3 Neighboring gene RIKEN cDNA D330041H03 gene Neighboring gene ribonucleic acid binding protein S1 Neighboring gene deoxyribonuclease 1-like 2 Neighboring gene E4F transcription factor 1

Genomic regions, transcripts, and products

Expression

  • Project title: Mouse ENCODE transcriptome data
  • Description: RNA profiling data sets generated by the Mouse ENCODE project.
  • BioProject: PRJNA66167
  • Publication: PMID 25409824
  • Analysis date: n/a

Bibliography

GeneRIFs: Gene References Into FunctionsWhat's a GeneRIF?

Variation

Alleles

Alleles of this type are documented at Mouse Genome Informatics  (MGI)

Pathways from BioSystems

Interactions

Products Interactant Other Gene Complex Source Pubs Description

General gene information

Markers

Homology

Gene Ontology Provided by MGI

Function Evidence Code Pubs
catalytic activity IEA
Inferred from Electronic Annotation
more info
 
dodecenoyl-CoA delta-isomerase activity IDA
Inferred from Direct Assay
more info
PubMed 
dodecenoyl-CoA delta-isomerase activity ISO
Inferred from Sequence Orthology
more info
 
enoyl-CoA hydratase activity IBA
Inferred from Biological aspect of Ancestor
more info
PubMed 
identical protein binding ISO
Inferred from Sequence Orthology
more info
 
isomerase activity IEA
Inferred from Electronic Annotation
more info
 
Process Evidence Code Pubs
fatty acid beta-oxidation IBA
Inferred from Biological aspect of Ancestor
more info
PubMed 
fatty acid beta-oxidation IMP
Inferred from Mutant Phenotype
more info
PubMed 
fatty acid metabolic process IEA
Inferred from Electronic Annotation
more info
 
lipid metabolic process IEA
Inferred from Electronic Annotation
more info
 
Component Evidence Code Pubs
mitochondrial inner membrane HDA PubMed 
mitochondrion HDA PubMed 
mitochondrion IBA
Inferred from Biological aspect of Ancestor
more info
PubMed 
mitochondrion ISO
Inferred from Sequence Orthology
more info
 
mitochondrion TAS
Traceable Author Statement
more info
PubMed 

General protein information

Preferred Names
enoyl-CoA delta isomerase 1, mitochondrial
Names
3,2 trans-enoyl-Coenyme A isomerase
3,2-trans-enoyl-CoA isomerase, mitochondrial
D3,D2-enoyl-CoA isomerase
delta(3),Delta(2)-enoyl-CoA isomerase
dodecenoyl-CoA isomerase
dodecenoyl-Coenzyme A delta isomerase (3,2 trans-enoyl-Coenyme A isomerase)
NP_034153.2

NCBI Reference Sequences (RefSeq)

RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_010023.4NP_034153.2  enoyl-CoA delta isomerase 1, mitochondrial precursor

    See identical proteins and their annotated locations for NP_034153.2

    Status: VALIDATED

    Source sequence(s)
    AC154237
    Consensus CDS
    CCDS28480.1
    UniProtKB/Swiss-Prot
    P42125
    Related
    ENSMUSP00000157291.1, ENSMUST00000234304.1
    Conserved Domains (1) summary
    pfam00378
    Location:39285
    ECH_1; Enoyl-CoA hydratase/isomerase

RefSeqs of Annotated Genomes: Mus musculus Annotation Release 106

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCm38.p4 C57BL/6J

Genomic

  1. NC_000083.6 Reference GRCm38.p4 C57BL/6J

    Range
    24426683..24439316
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
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