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LMJF_29_0390 putative RNA binding protein [ Leishmania major strain Friedlin ]

Gene ID: 12980894, updated on 21-Dec-2023

Summary

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Gene symbol
LMJF_29_0390
Gene description
putative RNA binding protein
Locus tag
LMJF_29_0390
Gene type
protein coding
RNA name
putative RNA binding protein
RefSeq status
PROVISIONAL
Organism
Leishmania major strain Friedlin (strain: Friedlin)
Lineage
Eukaryota; Euglenozoa; Kinetoplastida; Trypanosomatidae; Leishmaniinae; Leishmania
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Genomic context

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Location:
chromosome: 29
Exon count:
1
Sequence:
Chromosome: 29; NC_007270.2 (134475..135254, complement)

Chromosome 29 - NC_007270.2Genomic Context describing neighboring genes Neighboring gene protein kinase-like protein Neighboring gene hypothetical protein Neighboring gene hypothetical protein Neighboring gene hypothetical protein

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_007270.2

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. The genome of the kinetoplastid parasite, Leishmania major. Ivens AC, et al. Science, 2005 Jul 15. PMID 16020728, Free PMC Article
  2. Chromosome and gene copy number variation allow major structural change between species and strains of Leishmania. Rogers MB, et al. Genome Res, 2011 Dec. PMID 22038252, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables RNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in positive regulation of mRNA splicing, via spliceosome IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of U12-type spliceosomal complex IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in nucleolus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Names
putative RNA binding protein
XP_003722112.1
  • previous protein_id=AAZ09489.1

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_007270.2 Reference assembly

    Range
    134475..135254 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_003722064.1 → XP_003722112.1  putative RNA binding protein [Leishmania major strain Friedlin]

    See identical proteins and their annotated locations for XP_003722112.1

    Status: PROVISIONAL

    UniProtKB/TrEMBL
    E9ADP0
    Conserved Domains (2) summary
    smart00360
    Location:119 → 191
    RRM; RNA recognition motif
    cl17169
    Location:16 → 88
    RRM_SF; RNA recognition motif (RRM) superfamily
Nucleotide Protein
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