2JRS,2DGO,2KXN,2KM8,2D9P,2KI2,1HD0,1UAW,1X4D,2DNL,3NS5,1SJQ,1SJR,2KRB,1X4F,1S79,1WHX,2JVR,2CPY,2EK6,2KH9,2CQH,1WG5,2DGW,2BZ2,2GO9,2XNR,1QM9,2DNQ,2J76,2CPH,2YTC,2CPE,2DNG,1OIA,2JVO,2KXF,1WHW,2J0Q,2I2Y,2DO0,3MD3,1FXL,2CQ0,2CPJ,2CQB,2CJK,3MD1


Conserved Protein Domain Family
RRM

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smart00360: RRM 
Click on image for an interactive view with Cn3D
RNA recognition motif
Statistics
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PSSM-Id: 214636
Aligned: 524 rows
Threshold Bit Score: 30.2544
Threshold Setting Gi: 71998567
Created: 13-Jul-2011
Updated: 2-Oct-2020
Structure
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Program:
Drawing:
Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
2JRS_A        28 RLYVGSLHFNITEDMLRGIFe---------------PFGRIeSIQLMMDSetGRSKGYGFITFSDSECAKKALEQLNGFE 92  human
AAN71293     127 AILVTNLTSDATEADLRKVFn---------------DSGEIeSIIMLGQK--------AVVKFKDDEGFCKSFLANG-SI 182 fruit fly
NP_595599      3 RIIIKNIPRYYDKEKLSTYLksl-----------pqLDAEItDVSVAKTKe-GVSRRFAFIGFKNEEDADKAIRYLNKSY 70  Schizosaccharom...
EDZ68693       3 RIIVKGLPVYLTDDNLREHFtkrlrqkhshqavngsGPDLItDVKILRDRn-GESRRFGFIGYRNEEDAFDAVEYFNGSF 81  Saccharomyces c...
EGA58870      34 SIFIKNLPTITTRDDILNFFs---------------EVGPIkSIYLSNATkvk--ylWAFVTYKNSSDSEKAIKRYNNFY 96  Saccharomyces c...
XP_002823849  40 RLIVKNLPNGMKEERFRQLFa---------------AFGTLtDCSLKFTKd-GKFRKFGFIGFKSEEEAQKALKHFNKSF 103 Sumatran orangutan
AAC67539      87 AIFVGDLTPIAQEQTLNNIFk---------------EFGEItSIRLFP------SRGFAFVNYKDSESCVRAIAGMNGGL 145 Dictyostelium d...
NP_193696      3 RICVKNLPKHVKEDQLRDHFs---------------QKGEItDAKLMRSNd-GKSRQFGFIGFRSAQEAQQAIKYFNNTY 66  thale cress
NP_502432      4 RLIVKNLPSTCTEQQLRKFFe---------------KYGQIsDASLKYTKe-GKFRGFAFVGFLDEGSASNALAKSNQTF 67  nematode
CAA56649       3 RIIIKNLPERADEKILKQQFe---------------KFGGItDCKVMRTPq-GVSRKFGFIGFENEDQAQTAITKMNGAY 66  Entamoeba histo...
AAN71293     127 AILVTNLTSDATEADLRKVFn---------------DSGEIeSIIMLGQK--------AVVKFKDDEGFCKSFLANG-SI 182 fruit fly
NP_595599      3 RIIIKNIPRYYDKEKLSTYLksl-----------pqLDAEItDVSVAKTKe-GVSRRFAFIGFKNEEDADKAIRYLNKSY 70  Schizosaccharom...
EDZ68693       3 RIIVKGLPVYLTDDNLREHFtkrlrqkhshqavngsGPDLItDVKILRDRn-GESRRFGFIGYRNEEDAFDAVEYFNGSF 81  Saccharomyces c...
EGA58870      34 SIFIKNLPTITTRDDILNFFs---------------EVGPIkSIYLSNATkvk--ylWAFVTYKNSSDSEKAIKRYNNFY 96  Saccharomyces c...
XP_002823849  40 RLIVKNLPNGMKEERFRQLFa---------------AFGTLtDCSLKFTKd-GKFRKFGFIGFKSEEEAQKALKHFNKSF 103 Sumatran orangutan
AAC67539      87 AIFVGDLTPIAQEQTLNNIFk---------------EFGEItSIRLFP------SRGFAFVNYKDSESCVRAIAGMNGGL 145 Dictyostelium d...
NP_193696      3 RICVKNLPKHVKEDQLRDHFs---------------QKGEItDAKLMRSNd-GKSRQFGFIGFRSAQEAQQAIKYFNNTY 66  thale cress
NP_502432      4 RLIVKNLPSTCTEQQLRKFFe---------------KYGQIsDASLKYTKe-GKFRGFAFVGFLDEGSASNALAKSNQTF 67  nematode
CAA56649       3 RIIIKNLPERADEKILKQQFe---------------KFGGItDCKVMRTPq-GVSRKFGFIGFENEDQAQTAITKMNGAY 66  Entamoeba histo...
2JRS_A        93 LAGRPMKV 100 human
AAN71293     183 VNNAPIFI 190 fruit fly
NP_595599     71 VETSRIEV 78  Schizosaccharomyces pombe 972h-
EDZ68693      82 INTSKIEV 89  Saccharomyces cerevisiae AWRI1631
EGA58870      97 FRGKKLLV 104 Saccharomyces cerevisiae FostersB
XP_002823849 104 IDTSRITV 111 Sumatran orangutan
AAC67539     146 VDGNPVKV 153 Dictyostelium discoideum
NP_193696     67 LGTSLIIV 74  thale cress
NP_502432     68 FNSKKLTV 75  nematode
CAA56649      67 IQSSKLQV 74  Entamoeba histolytica
AAN71293     183 VNNAPIFI 190 fruit fly
NP_595599     71 VETSRIEV 78  Schizosaccharomyces pombe 972h-
EDZ68693      82 INTSKIEV 89  Saccharomyces cerevisiae AWRI1631
EGA58870      97 FRGKKLLV 104 Saccharomyces cerevisiae FostersB
XP_002823849 104 IDTSRITV 111 Sumatran orangutan
AAC67539     146 VDGNPVKV 153 Dictyostelium discoideum
NP_193696     67 LGTSLIIV 74  thale cress
NP_502432     68 FNSKKLTV 75  nematode
CAA56649      67 IQSSKLQV 74  Entamoeba histolytica
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