U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

hic2 hypermethylated in cancer 2 [ Anoplopoma fimbria (sablefish) ]

Gene ID: 129101582, updated on 26-Mar-2024

Summary

Go to the top of the page Help
Gene symbol
hic2
Gene description
hypermethylated in cancer 2
Gene type
protein coding
RefSeq status
MODEL
Organism
Anoplopoma fimbria
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Eupercaria; Perciformes; Cottioidei; Anoplopomatales; Anoplopomatidae; Anoplopoma
Orthologs
human zebrafish all
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

Go to the top of the page Help
Location:
chromosome: 13
Exon count:
2
Annotation release Status Assembly Chr Location
RS_2023_03 current Afim_UVic_2022 (GCF_027596085.1) 13 NC_072461.1 (10369319..10382263, complement)

Chromosome 13 - NC_072461.1Genomic Context describing neighboring genes Neighboring gene synaptosome associated protein 29 Neighboring gene phosphatidylinositol 4-kinase, catalytic, alpha b Neighboring gene serpin peptidase inhibitor, clade D (heparin cofactor), member 1 Neighboring gene melanocyte-stimulating hormone receptor-like Neighboring gene adrenocorticotropic hormone receptor-like

Genomic regions, transcripts, and products

Go to the top of the page Help
Genomic Sequence:
NC_072461.1 Chromosome 13 Reference Afim_UVic_2022

Go to nucleotide: Graphics FASTA GenBank

Bibliography

Go to the top of the pageHelp

Related articles in PubMed

  1. Genomics of sablefish (Anoplopoma fimbria): expressed genes, mitochondrial phylogeny, linkage map and identification of a putative sex gene. Rondeau EB, et al. BMC Genomics, 2013 Jul 6. PMID 23829495, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

Go to the top of the page Help

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables DNA-binding transcription factor activity, RNA polymerase II-specific IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables RNA polymerase II cis-regulatory region sequence-specific DNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in regulation of transcription by RNA polymerase II IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

Go to the top of the page Help
Preferred Names
hypermethylated in cancer 2 protein

NCBI Reference Sequences (RefSeq)

Go to the top of the page Help

NEW Try the new Transcript table

RefSeqs of Annotated Genomes: GCF_027596085.1-RS_2023_03

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Afim_UVic_2022

Genomic

  1. NC_072461.1 Reference Afim_UVic_2022

    Range
    10369319..10382263 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_054611451.1 → XP_054467426.1  hypermethylated in cancer 2 protein

Nucleotide Protein
Heading Accession and Version

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.