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trpa1b transient receptor potential cation channel, subfamily A, member 1b [ Girardinichthys multiradiatus ]

Gene ID: 124858214, updated on 22-Mar-2024

Summary

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Gene symbol
trpa1b
Gene description
transient receptor potential cation channel, subfamily A, member 1b
See related
EnsemblRapid:ENSGMLG00005005605
Gene type
protein coding
RefSeq status
MODEL
Organism
Girardinichthys multiradiatus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Ovalentaria; Atherinomorphae; Cyprinodontiformes; Goodeidae; Girardinichthys
Orthologs
human zebrafish all
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Genomic context

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Location:
chromosome: 21
Exon count:
29
Annotation release Status Assembly Chr Location
100 current DD_fGirMul_XY1 (GCF_021462225.1) 21 NC_061813.1 (22479073..22517436)

Chromosome 21 - NC_061813.1Genomic Context describing neighboring genes Neighboring gene somatomedin-B and thrombospondin type-1 domain-containing protein Neighboring gene potassium voltage-gated channel subfamily B member 2-like Neighboring gene telomeric repeat binding factor (NIMA-interacting) 1 Neighboring gene uncharacterized LOC124858085 Neighboring gene musculin Neighboring gene EYA transcriptional coactivator and phosphatase 1

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_061813.1 Chromosome 21 Reference DD_fGirMul_XY1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables monoatomic ion channel activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in monoatomic ion transport IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in transmembrane transport IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
transient receptor potential cation channel subfamily A member 1b

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Girardinichthys multiradiatus Annotation Release 100

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference DD_fGirMul_XY1

Genomic

  1. NC_061813.1 Reference DD_fGirMul_XY1

    Range
    22479073..22517436
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_047350128.1 → XP_047206084.1  transient receptor potential cation channel subfamily A member 1b

    Related
    ENSGMLP00005009743.1, ENSGMLT00005009964.1
Nucleotide Protein
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