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These reference sequences exist independently of genome builds. Explain
These reference sequences are curated independently of the genome
annotation cycle, so their versions may not match the RefSeq versions in the current
genome build. Identify version mismatches by comparing the version of the RefSeq in
this section to the one reported in Genomic regions,
transcripts, and products above.
mRNA and Protein(s)
-
NM_001085448.1 → NP_001078917.1 catenin delta-1 isoform 2
See identical proteins and their annotated locations for NP_001078917.1
Status: VALIDATED
- Description
- Transcript Variant: This variant (3) lacks a 5' UTR segment and an alternate exon in the 3' coding region compared to variant 1. The resulting isoform (2) is shorter than isoform 1. Variants 3 and 7 both encode the same isoform (2).
- Source sequence(s)
-
AK133193, AK161790, AL929079, BC043108, BY422861
- Consensus CDS
-
CCDS50623.1
- UniProtKB/Swiss-Prot
-
P30999
- Related
- ENSMUSP00000107326.3, ENSMUST00000111697.9
- Conserved Domains (3) summary
-
- smart00185
Location:397 → 437
- ARM; Armadillo/beta-catenin-like repeats
- cd13394
Location:632 → 740
- Syo1_like; Fungal symportin 1 (syo1) and similar proteins
- sd00043
Location:368 → 393
- ARM; armadillo repeat [structural motif]
-
NM_001085449.1 → NP_001078918.1 catenin delta-1 isoform 3
Status: VALIDATED
- Description
- Transcript Variant: This variant (4) has multiple differences and uses a downstream start codon, compared to variant 1. The resulting protein (isoform 3) has a shorter N-terminus, compared to isoform 1.
- Source sequence(s)
-
AK161790, AK168453, AL929079, BC043108, BY422861
- Consensus CDS
-
CCDS50621.1
- UniProtKB/Swiss-Prot
-
P30999
- UniProtKB/TrEMBL
-
E9Q986
- Related
- ENSMUSP00000107299.3, ENSMUST00000111670.9
- Conserved Domains (2) summary
-
- cd00020
Location:262 → 380
- ARM; Armadillo/beta-catenin-like repeats. An approximately 40 amino acid long tandemly repeated sequence motif first identified in the Drosophila segment polarity gene armadillo; these repeats were also found in the mammalian armadillo homolog beta-catenin, ...
- sd00043
Location:267 → 292
- ARM; armadillo repeat [structural motif]
-
NM_001085450.1 → NP_001078919.1 catenin delta-1 isoform 1
See identical proteins and their annotated locations for NP_001078919.1
Status: VALIDATED
- Description
- Transcript Variant: This variant (2) lacks a segment in the 5' UTR compared to variant 1. Variants 1, 2, and 6 all encode the same isoform (1).
- Source sequence(s)
-
BC043108, BY422861, CJ174738
- Consensus CDS
-
CCDS16186.1
- UniProtKB/Swiss-Prot
- P30999, Q8CHF8
- Related
- ENSMUSP00000107320.2, ENSMUST00000111691.2
- Conserved Domains (3) summary
-
- smart00185
Location:397 → 437
- ARM; Armadillo/beta-catenin-like repeats
- cd13394
Location:632 → 740
- Syo1_like; Fungal symportin 1 (syo1) and similar proteins
- sd00043
Location:368 → 393
- ARM; armadillo repeat [structural motif]
-
NM_001085453.2 → NP_001078922.1 catenin delta-1 isoform 4
See identical proteins and their annotated locations for NP_001078922.1
Status: VALIDATED
- Description
- Transcript Variant: This variant (5) has multiple differences, compared to variant 1. The resulting protein (isoform 4) is shorter when it is compared to isoform 1. Variant 5 is also known as CAS 1B.
- Source sequence(s)
-
AL928616, AL929079
- Consensus CDS
-
CCDS50622.1
- UniProtKB/Swiss-Prot
-
P30999
- Related
- ENSMUSP00000065252.4, ENSMUST00000066177.10
- Conserved Domains (3) summary
-
- smart00185
Location:397 → 437
- ARM; Armadillo/beta-catenin-like repeats
- sd00043
Location:368 → 393
- ARM; armadillo repeat [structural motif]
- pfam00514
Location:440 → 481
- Arm; Armadillo/beta-catenin-like repeat
-
NM_001355064.1 → NP_001341993.1 catenin delta-1 isoform 1
Status: VALIDATED
- Description
- Transcript Variant: This variant (6), as well as variants 1 and 2, encodes isoform 1.
- Source sequence(s)
-
AK133193, AL928616, AL929079
- Consensus CDS
-
CCDS16186.1
- UniProtKB/Swiss-Prot
-
Q8CHF8
- Conserved Domains (3) summary
-
- smart00185
Location:397 → 437
- ARM; Armadillo/beta-catenin-like repeats
- cd13394
Location:632 → 740
- Syo1_like; Fungal symportin 1 (syo1) and similar proteins
- sd00043
Location:368 → 393
- ARM; armadillo repeat [structural motif]
-
NM_001355065.1 → NP_001341994.1 catenin delta-1 isoform 2
Status: VALIDATED
- Description
- Transcript Variant: This variant (7), as well as variant 3, encodes isoform 2.
- Source sequence(s)
-
AB093237, AL928616, AL929079
- Consensus CDS
-
CCDS50623.1
- Related
- ENSMUSP00000042543.7, ENSMUST00000036811.13
- Conserved Domains (3) summary
-
- smart00185
Location:397 → 437
- ARM; Armadillo/beta-catenin-like repeats
- cd13394
Location:632 → 740
- Syo1_like; Fungal symportin 1 (syo1) and similar proteins
- sd00043
Location:368 → 393
- ARM; armadillo repeat [structural motif]
-
NM_001355066.1 → NP_001341995.1 catenin delta-1 isoform 5
Status: VALIDATED
- Source sequence(s)
-
AL928616, AL929079
- Consensus CDS
-
CCDS89504.1
- UniProtKB/TrEMBL
-
G3X9V2
- Related
- ENSMUSP00000107321.2, ENSMUST00000111692.8
- Conserved Domains (2) summary
-
- smart00185
Location:397 → 437
- ARM; Armadillo/beta-catenin-like repeats
- sd00043
Location:368 → 393
- ARM; armadillo repeat [structural motif]
-
NM_001355067.1 → NP_001341996.1 catenin delta-1 isoform 6
Status: VALIDATED
- Source sequence(s)
-
AL928616, AL929079
- Related
- ENSMUSP00000107306.2, ENSMUST00000111677.8
- Conserved Domains (2) summary
-
- smart00185
Location:296 → 336
- ARM; Armadillo/beta-catenin-like repeats
- sd00043
Location:267 → 292
- ARM; armadillo repeat [structural motif]
-
NM_007615.4 → NP_031641.2 catenin delta-1 isoform 1
See identical proteins and their annotated locations for NP_031641.2
Status: VALIDATED
- Description
- Transcript Variant: This variant (1) encodes the longest isoform (1). Variants 1, 2, and 6 all encode the same isoform (1).
- Source sequence(s)
-
BC043108, BC054544, BY422861, CJ174738
- Consensus CDS
-
CCDS16186.1
- UniProtKB/Swiss-Prot
- P30999, Q8CHF8
- Related
- ENSMUSP00000064518.4, ENSMUST00000067232.10
- Conserved Domains (3) summary
-
- smart00185
Location:397 → 437
- ARM; Armadillo/beta-catenin-like repeats
- cd13394
Location:632 → 740
- Syo1_like; Fungal symportin 1 (syo1) and similar proteins
- sd00043
Location:368 → 393
- ARM; armadillo repeat [structural motif]