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Calm2 calmodulin 2 [ Mus musculus (house mouse) ]

Gene ID: 12314, updated on 3-Jun-2018
Official Symbol
Calm2provided by MGI
Official Full Name
calmodulin 2provided by MGI
Primary source
MGI:MGI:103250
See related
Ensembl:ENSMUSG00000036438 Vega:OTTMUSG00000022552
Gene type
protein coding
RefSeq status
VALIDATED
Organism
Mus musculus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
Also known as
Cam2; CamC; AL024017; 1500001E21Rik
Expression
Biased expression in frontal lobe adult (RPKM 625.9), cortex adult (RPKM 540.2) and 13 other tissues See more
Orthologs
See Calm2 in Genome Data Viewer
Location:
17; 17 E4
Exon count:
6
Annotation release Status Assembly Chr Location
106 current GRCm38.p4 (GCF_000001635.24) 17 NC_000083.6 (87433401..87446935, complement)
Build 37.2 previous assembly MGSCv37 (GCF_000001635.18) 17 NC_000083.5 (87832741..87846275, complement)

Chromosome 17 - NC_000083.6Genomic Context describing neighboring genes Neighboring gene tetratricopeptide repeat domain 7 Neighboring gene uncharacterized LOC102632541 Neighboring gene sperm tail PG rich repeat containing 4 Neighboring gene predicted gene, 30794 Neighboring gene predicted gene, 30938

  • Project title: Mouse ENCODE transcriptome data
  • Description: RNA profiling data sets generated by the Mouse ENCODE project.
  • BioProject: PRJNA66167
  • Publication: PMID 25409824
  • Analysis date: n/a
Products Interactant Other Gene Complex Source Pubs Description

Markers

Homology

Gene Ontology Provided by MGI

Function Evidence Code Pubs
adenylate cyclase binding ISO
Inferred from Sequence Orthology
more info
 
calcium ion binding ISO
Inferred from Sequence Orthology
more info
 
calcium ion binding TAS
Traceable Author Statement
more info
PubMed 
calcium-dependent protein binding ISO
Inferred from Sequence Orthology
more info
 
enzyme regulator activity ISO
Inferred from Sequence Orthology
more info
 
ion channel binding ISO
Inferred from Sequence Orthology
more info
 
nitric-oxide synthase binding ISO
Inferred from Sequence Orthology
more info
 
nitric-oxide synthase regulator activity ISO
Inferred from Sequence Orthology
more info
 
phosphatidylinositol 3-kinase binding ISO
Inferred from Sequence Orthology
more info
 
protein N-terminus binding ISO
Inferred from Sequence Orthology
more info
 
protein domain specific binding ISO
Inferred from Sequence Orthology
more info
 
type 3 metabotropic glutamate receptor binding ISO
Inferred from Sequence Orthology
more info
 
Process Evidence Code Pubs
G2/M transition of mitotic cell cycle IDA
Inferred from Direct Assay
more info
PubMed 
Component Evidence Code Pubs
cytoplasm ISO
Inferred from Sequence Orthology
more info
 
growth cone ISO
Inferred from Sequence Orthology
more info
 
colocalizes_with mitochondrial membrane ISO
Inferred from Sequence Orthology
more info
 
myelin sheath ISO
Inferred from Sequence Orthology
more info
 
neuron projection ISO
Inferred from Sequence Orthology
more info
 
nucleus ISO
Inferred from Sequence Orthology
more info
 
plasma membrane ISO
Inferred from Sequence Orthology
more info
 
colocalizes_with synaptic vesicle membrane ISO
Inferred from Sequence Orthology
more info
 
voltage-gated potassium channel complex IGI
Inferred from Genetic Interaction
more info
PubMed 
Preferred Names
calmodulin-2; calmodulin
Names
caM
NP_031615.1
XP_006523602.1

RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001355703.1NP_001342632.1  calmodulin-2 isoform 2

    Status: VALIDATED

    Source sequence(s)
    BY095488, BY663775, CX565080
    Conserved Domains (1) summary
    cl25352
    Location:1113
    EFh_PEF; The penta-EF hand (PEF) family
  2. NM_007589.5NP_031615.1  calmodulin-2 isoform 1

    See identical proteins and their annotated locations for NP_031615.1

    Status: VALIDATED

    Source sequence(s)
    BC100301, BY095488, BY660536
    Consensus CDS
    CCDS37716.1
    UniProtKB/Swiss-Prot
    P0DP26, P0DP27, P0DP28
    Related
    ENSMUSP00000048857.6, OTTMUSP00000025724, ENSMUST00000040440.6, OTTMUST00000054017
    Conserved Domains (1) summary
    PTZ00184
    Location:1149
    PTZ00184; calmodulin; Provisional

RefSeqs of Annotated Genomes: Mus musculus Annotation Release 106

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCm38.p4 C57BL/6J

Genomic

  1. NC_000083.6 Reference GRCm38.p4 C57BL/6J

    Range
    87433401..87446935 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_006523539.3XP_006523602.1  calmodulin isoform X1

    Conserved Domains (1) summary
    cl25352
    Location:1113
    EFh_PEF; The penta-EF hand (PEF) family
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