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LOC122759017 1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase delta-4-like [ Solea senegalensis (Senegalese sole) ]

Gene ID: 122759017, updated on 30-Nov-2023

Summary

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Gene symbol
LOC122759017
Gene description
1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase delta-4-like
Locus tag
JOB18_035860
Gene type
protein coding
RefSeq status
MODEL
Organism
Solea senegalensis
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Carangaria; Pleuronectiformes; Pleuronectoidei; Soleidae; Solea
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Genomic context

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See LOC122759017 in Genome Data Viewer
Location:
chromosome: LG2
Exon count:
16
Annotation release Status Assembly LG Location
100 current IFAPA_SoseM_1 (GCF_019176455.1) LG2 NC_058022.1 (5473092..5488024)

Linkage Group LG2 - NC_058022.1Genomic Context describing neighboring genes Neighboring gene ubiquitin specific peptidase 37 Neighboring gene ybeY metalloendoribonuclease Neighboring gene CCR4-NOT transcription complex subunit 9 Neighboring gene zinc finger protein 142 Neighboring gene tensin 1b Neighboring gene myeloid leukemia factor 1-like

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_058022.1 Chromosome LG2 Reference IFAPA_SoseM_1 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables calcium ion binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables phosphatidylinositol phospholipase C activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in intracellular signal transduction IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in lipid metabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase delta-4-like
Names
1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase delta-4

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Solea senegalensis Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference IFAPA_SoseM_1 Primary Assembly

Genomic

  1. NC_058022.1 Reference IFAPA_SoseM_1 Primary Assembly

    Range
    5473092..5488024
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_044013484.1 → XP_043869419.1  1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase delta-4-like isoform X2

    Conserved Domains (5) summary
    cd00275
    Location:617 → 744
    C2_PLC_like; C2 domain present in Phosphoinositide-specific phospholipases C (PLC)
    cd08593
    Location:288 → 585
    PI-PLCc_delta; Catalytic domain of metazoan phosphoinositide-specific phospholipase C-delta
    cd15898
    Location:137 → 166
    EFh_PI-PLC; EF-hand motif [structural motif]
    cl28895
    Location:137 → 276
    EFh_PI-PLC; EF-hand motif found in eukaryotic phosphoinositide-specific phospholipase C (PI-PLC, EC 3.1.4.11) isozymes
    cl17171
    Location:17 → 132
    PH-like; Pleckstrin homology-like domain

  2. XM_044013492.1 → XP_043869427.1  1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase delta-4-like isoform X2

    Conserved Domains (5) summary
    cd00275
    Location:617 → 744
    C2_PLC_like; C2 domain present in Phosphoinositide-specific phospholipases C (PLC)
    cd08593
    Location:288 → 585
    PI-PLCc_delta; Catalytic domain of metazoan phosphoinositide-specific phospholipase C-delta
    cd15898
    Location:137 → 166
    EFh_PI-PLC; EF-hand motif [structural motif]
    cl28895
    Location:137 → 276
    EFh_PI-PLC; EF-hand motif found in eukaryotic phosphoinositide-specific phospholipase C (PI-PLC, EC 3.1.4.11) isozymes
    cl17171
    Location:17 → 132
    PH-like; Pleckstrin homology-like domain

  3. XM_044013475.1 → XP_043869410.1  1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase delta-4-like isoform X1

    Conserved Domains (5) summary
    cd00275
    Location:625 → 752
    C2_PLC_like; C2 domain present in Phosphoinositide-specific phospholipases C (PLC)
    cd08593
    Location:296 → 593
    PI-PLCc_delta; Catalytic domain of metazoan phosphoinositide-specific phospholipase C-delta
    cd15898
    Location:145 → 174
    EFh_PI-PLC; EF-hand motif [structural motif]
    cl28895
    Location:145 → 284
    EFh_PI-PLC; EF-hand motif found in eukaryotic phosphoinositide-specific phospholipase C (PI-PLC, EC 3.1.4.11) isozymes
    cl17171
    Location:25 → 140
    PH-like; Pleckstrin homology-like domain
Nucleotide Protein
Heading Accession and Version

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