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LOC122605362 zinc finger CCCH domain-containing protein 41 [ Erigeron canadensis ]

Gene ID: 122605362, updated on 30-Nov-2023

Summary

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Gene symbol
LOC122605362
Gene description
zinc finger CCCH domain-containing protein 41
Gene type
protein coding
RefSeq status
MODEL
Organism
Erigeron canadensis
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Astereae; North American clade; Conyzinae; Erigeron
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Genomic context

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See LOC122605362 in Genome Data Viewer
Location:
chromosome: 6
Exon count:
6
Annotation release Status Assembly Chr Location
100 current C_canadensis_v1 (GCF_010389155.1) 6 NC_057766.1 (33930116..33935597, complement)

Chromosome 6 - NC_057766.1Genomic Context describing neighboring genes Neighboring gene high affinity nitrate transporter 2.7 Neighboring gene transfer RNA glutamic acid (anticodon CUC) Neighboring gene oleosin Ara h 10.0102-like Neighboring gene mitogen-activated protein kinase kinase 3

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_057766.1 Chromosome 6 Reference C_canadensis_v1 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables RNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables metal ion binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
zinc finger CCCH domain-containing protein 41

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Erigeron canadensis Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference C_canadensis_v1 Primary Assembly

Genomic

  1. NC_057766.1 Reference C_canadensis_v1 Primary Assembly

    Range
    33930116..33935597 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_043778289.1 → XP_043634224.1  zinc finger CCCH domain-containing protein 41

    Conserved Domains (4) summary
    smart00356
    Location:223 → 243
    ZnF_C3H1; zinc finger
    smart00360
    Location:443 → 509
    RRM; RNA recognition motif
    smart00935
    Location:576 → 627
    OmpH; Outer membrane protein (OmpH-like)
    pfam17054
    Location:42 → 164
    JUPITER; Microtubule-Associated protein Jupiter

  2. XM_043778288.1 → XP_043634223.1  zinc finger CCCH domain-containing protein 41

    Conserved Domains (4) summary
    smart00356
    Location:223 → 243
    ZnF_C3H1; zinc finger
    smart00360
    Location:443 → 509
    RRM; RNA recognition motif
    smart00935
    Location:576 → 627
    OmpH; Outer membrane protein (OmpH-like)
    pfam17054
    Location:42 → 164
    JUPITER; Microtubule-Associated protein Jupiter

RNA

  1. XR_006324602.1 RNA Sequence

Nucleotide Protein
Heading Accession and Version

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